Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40277
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 128 1e-28
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 116 8e-25
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 109 7e-23
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 95 2e-18
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 75 1e-12
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 74 4e-12
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 71 2e-11
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 71 4e-11
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 71 4e-11
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 70 5e-11
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 68 3e-10
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 52 1e-05
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 52 1e-05
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 51 3e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 48 2e-04
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 41 0.027
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 40 0.082
UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=... 34 3.1
UniRef50_Q4RYG4 Cluster: Chromosome 2 SCAF14976, whole genome sh... 33 5.4
UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970; ... 33 7.2
UniRef50_Q8VHD8 Cluster: Hornerin; n=6; Mus musculus|Rep: Horner... 33 9.5
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 128 bits (310), Expect = 1e-28
Identities = 58/84 (69%), Positives = 63/84 (75%)
Frame = +1
Query: 256 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 435
G TYGKPKSHGVNQLKP R LQSIAEE +SYW+AQD+SYKYFEVIL+D
Sbjct: 78 GCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDT 137
Query: 436 SHKAIRRDPKINWIVNAVHKHREM 507
H AIRRDPKINWI VHKHRE+
Sbjct: 138 HHSAIRRDPKINWICKHVHKHREL 161
Score = 116 bits (278), Expect = 8e-25
Identities = 50/57 (87%), Positives = 56/57 (98%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQ 57
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 510 GLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 635
GLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 163 GLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 116 bits (278), Expect = 8e-25
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = +1
Query: 256 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDP 435
GATYGKP HGVNQLK R+LQS+AEE +SYWV +DS+YK+FEVIL+DP
Sbjct: 78 GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137
Query: 436 SHKAIRRDPKINWIVNAVHKHREM 507
HKAIRR+P WI VHKHREM
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREM 161
Score = 110 bits (265), Expect = 3e-23
Identities = 49/57 (85%), Positives = 54/57 (94%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQ 57
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +3
Query: 510 GLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 635
GLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R
Sbjct: 163 GLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 109 bits (262), Expect = 7e-23
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = +1
Query: 250 C*GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILV 429
C G TYGKPK+HGVN+LK ++ Q++AE +SYWVA+DS+YK++EV+L+
Sbjct: 76 CKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLI 135
Query: 430 DPSHKAIRRDPKINWIVNAVHKHRE 504
DP HKAIRR+P WI VHKHRE
Sbjct: 136 DPFHKAIRRNPDTQWITKPVHKHRE 160
Score = 100 bits (239), Expect = 4e-20
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQ
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQ 57
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +3
Query: 510 GLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 635
GLTSAGR SRGLGKG R+S T+GGS+ W R+NT RKR
Sbjct: 163 GLTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 94.7 bits (225), Expect = 2e-18
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNE 57
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+ K GVN++ +NLQ IAEE +SYWV +D S K+FE IL+DP H AI
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAI 142
Query: 451 RRDPKINWIVNAVHKHR 501
+ D +NWI + HK+R
Sbjct: 143 QNDDDLNWICDDSHKNR 159
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +2
Query: 35 YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
Y +I+E + + L R +R+ + R RPTR DKAR LGY+AKQ
Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQ 59
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/77 (45%), Positives = 43/77 (55%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
KP G + P ++LQ IAEE +SYWV +D YK+FEVI+VDP H I
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140
Query: 451 RRDPKINWIVNAVHKHR 501
+ DPKI WI HK R
Sbjct: 141 KSDPKIAWIALKHHKGR 157
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MG Y+YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQ
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQ 57
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 71.3 bits (167), Expect = 2e-11
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Frame = -3
Query: 507 HLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFLS 328
HL++L+ DP+ +R++++ + ++EDNL+ + I NPV Q +FLS
Sbjct: 21 HLSVLVDWFGDPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFLS 80
Query: 327 NGLKVARGLQLVDTMALGLAISGTLATGRLRPPR--RTRILNTT*PCLAR*PSLRALSGL 154
N LK + +QLV+T+ LAIS TL + +TT L PS LSG
Sbjct: 81 NRLKASGKVQLVNTVVNRLAISCTLRKWAFSTTTADTNPVKDTTLLSLVSQPS---LSGW 137
Query: 153 VGLGARCIRVN*RYCHTLTRNKKRITSLSFFLYNS 49
+G GA N +YC T +K I S FFL++S
Sbjct: 138 MGWGALYSAENWQYCQQWTLRRKHIMSDCFFLHSS 172
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+PK GV P ++ + IAEE +SYWVA+D Y+++EVILVDP H AI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAI 162
Query: 451 RRDPKINWIVNAVHKHR 501
DP++ WI H+ R
Sbjct: 163 CSDPELKWICEKQHRGR 179
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +2
Query: 14 QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 193
Q+ G Y +++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 194 Q 196
Q
Sbjct: 79 Q 79
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+PK GV + + NLQ +AE+ SYWV +D+ YK+FEV+++DPSH AI
Sbjct: 81 RPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPSHPAI 140
Query: 451 RRDPKINWIVNAVHK 495
R DP W+V ++
Sbjct: 141 RNDPDYAWVVGKEYR 155
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/57 (38%), Positives = 39/57 (68%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MG RY+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQ
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQ 57
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
MGAYR + EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQ
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQ 54
Score = 46.8 bits (106), Expect(2) = 3e-06
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 412 FEVILVDPSHKAIRRDPKINWIVNAVHKHREM 507
FE+ILVD +H AIR D +INW+ VHKH E+
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKHGEL 394
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 510 GLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 635
GLTSAG RGL GKGH + + + S RA W R T+ LRR R
Sbjct: 396 GLTSAGNKYRGLRGKGHTHHKARPSSPRATWKRNQTVSLRRYR 438
Score = 27.1 bits (57), Expect(2) = 3e-06
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 256 GATYGKPKSHGVNQLKPTRN 315
G Y KPK G+ QLK RN
Sbjct: 337 GIVYSKPKHQGITQLKFQRN 356
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+PK GV P++ + IAEE SY+VA+D YKY+EVI+VD SH I
Sbjct: 81 RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVI 140
Query: 451 RRDPKINWIVNAVHKHR 501
R DP++ W+ ++V++ R
Sbjct: 141 RSDPELKWLQDSVNRKR 157
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +2
Query: 26 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
+ Y YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQ
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQ 57
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/84 (33%), Positives = 42/84 (50%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+PK GV + ++ + +AEE +SYWVA D Y+YFEVIL+D + I
Sbjct: 83 RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTI 142
Query: 451 RRDPKINWIVNAVHKHREMLV*LR 522
+ DP + I R ++ LR
Sbjct: 143 KNDPLYSGICGREVPRRRIIRRLR 166
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 32 AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
AY Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQ
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQ 59
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 451 RRDPKIN 471
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+PK GV ++K +++ +A SY+V +D +Y +FEVIL DPSH +
Sbjct: 78 RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSHPRV 137
Query: 451 RRDPKINWIVNA 486
+DP++ V A
Sbjct: 138 AKDPELRDRVGA 149
Score = 37.1 bits (82), Expect = 0.44
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 92 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
+R RV +R+ + R RPTR D+AR LGY+AKQ
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQ 54
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +1
Query: 271 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 450
+PK GV ++K N++++AE SY++ +D + +FEVIL DP H +
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRV 176
Query: 451 RRDPKI 468
+D ++
Sbjct: 177 AQDKEL 182
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 92 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 196
LR RV +R+ + R +P+R +ARRLGY+AKQ
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQ 93
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 41.1 bits (92), Expect = 0.027
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = -3
Query: 507 HLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFLS 328
HL +L+ DP+ +RI+++ + ++EDNL + I NPVR Q + L
Sbjct: 42 HLPVLVEWFDDPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQDAQSPMVASSSLLC 101
Query: 327 NGLKVARGL 301
NGLK + L
Sbjct: 102 NGLKASSKL 110
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 39.5 bits (88), Expect = 0.082
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = -3
Query: 501 TMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNP 382
++L++ + DPVD I ++G+V RV++DNL +LV R+L P
Sbjct: 469 SVLVHRVADPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508
>UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=1;
Azoarcus sp. BH72|Rep: General secretion pathway protein
F - Azoarcus sp. (strain BH72)
Length = 401
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -3
Query: 330 SNGLKVARGL-QLVDTMALGLAISGTLATGRLRPPRRTRIL 211
+ L V GL Q+ D +A G +SG LA+ R+ PPR TR+L
Sbjct: 294 AGNLVVRTGLEQVADDIAAGADLSGALASTRVFPPRVTRML 334
>UniRef50_Q4RYG4 Cluster: Chromosome 2 SCAF14976, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF14976, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 359
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 428 WTR-HTRPFVAILRSTGS*MLYISIVRCWSDFGWSQLPRS 544
W R T PF A++R G+ +L + + +CW GW LPR+
Sbjct: 266 WIRMETAPFSALIRDCGT-LLGLGLAQCWRPCGW-PLPRA 303
>UniRef50_Q6ZWG3 Cluster: CDNA FLJ41135 fis, clone BRACE2028970;
n=2; Homo sapiens|Rep: CDNA FLJ41135 fis, clone
BRACE2028970 - Homo sapiens (Human)
Length = 142
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 109 AVPSVDSYAPRSQAHKAGQSPKTRLPC*TRLCCIQNPCATWWPQA--SSC*GATYGKPKS 282
A P V+S+ PR+Q H A P+T P T + + PC W + SSC G G +
Sbjct: 42 AHPQVESWVPRAQTHPA--PPQTWAPFFT-MHSSEQPCRQTWRASVLSSCEGLCLGPWRH 98
Query: 283 HGVNQLKPTRNLQSI 327
G + N++ +
Sbjct: 99 CGAGTGRAPANIKGV 113
>UniRef50_Q8VHD8 Cluster: Hornerin; n=6; Mus musculus|Rep: Hornerin
- Mus musculus (Mouse)
Length = 2496
Score = 32.7 bits (71), Expect = 9.5
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 417 GYPRGPVTQGHSSRS*DQLDRECCT*AS*DAGLTSAGRSSRGLGKGHRYSQTKGGSRRAA 596
G+P+ QG SS S + EC + + G +S G + G G + Y + GSR ++
Sbjct: 201 GFPQPGSEQGQSSSSSTKGSGECYSSGNGKHGSSSGGSAVSGSGHSNTYGKQGTGSRHSS 260
Query: 597 WLRRN 611
RR+
Sbjct: 261 SNRRS 265
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,886,018
Number of Sequences: 1657284
Number of extensions: 14861757
Number of successful extensions: 37602
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 36275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37582
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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