Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40276
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.5  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   7.5  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   9.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 530 PENYSIWYAEYKY 568
           P NYS WY  + Y
Sbjct: 202 PANYSGWYLNHDY 214


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 530 PENYSIWYAEYKY 568
           P NYS WY  + Y
Sbjct: 202 PANYSGWYLNHDY 214


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 96  KCDSLGNKEGACEKMSVQYF*GGQ*VRLC 10
           KC++L      C + SV Y  G    +LC
Sbjct: 354 KCNTLERTPSKCSQTSVHYSNGQTHSQLC 382


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 336 HTSYLFCPPSCSVHQLTP 283
           HT+  FC P C  + + P
Sbjct: 39  HTTNAFCLPFCGPNVINP 56


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 336 HTSYLFCPPSCSVHQLTP 283
           HT+  FC P C  + + P
Sbjct: 38  HTTNAFCLPFCGPNVINP 55


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 93 CDSLGNKEGACEK 55
          C SLG   G CEK
Sbjct: 39 CHSLGKAGGHCEK 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,010
Number of Sequences: 438
Number of extensions: 3204
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)