Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40275
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2... 47 6e-05
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein. 47 6e-05
BC051772-1|AAH51772.1| 258|Homo sapiens DST protein protein. 34 0.45
BC004912-1|AAH04912.2| 258|Homo sapiens DST protein protein. 34 0.45
AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein. 34 0.45
AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein. 34 0.45
AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein. 34 0.45
AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid anti... 34 0.45
AB018271-1|BAA34448.2| 1637|Homo sapiens KIAA0728 protein protein. 34 0.45
AF485466-1|AAL96553.1| 104|Homo sapiens immunoglobulin light ch... 30 5.5
AF485464-1|AAL96551.1| 104|Homo sapiens immunoglobulin light ch... 30 5.5
AF485458-1|AAL96545.1| 104|Homo sapiens immunoglobulin light ch... 30 5.5
BC063130-1|AAH63130.1| 298|Homo sapiens chromosome 7 open readi... 30 7.3
BC026000-1|AAH26000.1| 216|Homo sapiens C7orf46 protein protein. 30 7.3
AF485474-1|AAL96561.1| 104|Homo sapiens immunoglobulin light ch... 30 7.3
X98093-1|CAA66719.1| 1239|Homo sapiens DNA polymerase gamma prot... 29 9.7
U60325-1|AAC50712.1| 1239|Homo sapiens DNA polymerase gamma prot... 29 9.7
D84103-1|BAA12223.1| 1241|Homo sapiens mitochondrial DNA polymer... 29 9.7
BC050559-1|AAH50559.1| 1239|Homo sapiens POLG protein protein. 29 9.7
BC042571-1|AAH42571.1| 1239|Homo sapiens polymerase (DNA directe... 29 9.7
AF497906-1|AAM77583.1| 1240|Homo sapiens polymerase (DNA directe... 29 9.7
>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
alpha-2-macroglobulin domain containing 8 protein.
Length = 1885
Score = 46.8 bits (106), Expect = 6e-05
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 292 ILNGGEYRGFWVRWDSGIISAGREGE---AIPFISWSDPEPFPVYYVGVCTSWGATSSLK 462
IL+ E+R FW+ W G+I G E ++W+ P P V ++G T WG+ +
Sbjct: 1029 ILSWDEFRTFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQFIGFSTGWGSMGEFR 1088
Query: 463 I 465
I
Sbjct: 1089 I 1089
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +2
Query: 71 VATDDNLQYQFF--PVSSGSVQFKVRAANDAHIALTTGPQESDPMYEVMIGGWGNAKSVI 244
++T + ++Q+ P+ VRA NDA +AL++GPQ++ M E+++GG N +S I
Sbjct: 953 ISTPNKYEFQYVQRPLRLTRFDVAVRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWI 1012
Query: 245 RKNK 256
+K
Sbjct: 1013 STSK 1016
>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
Length = 1884
Score = 46.8 bits (106), Expect = 6e-05
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 292 ILNGGEYRGFWVRWDSGIISAGREGE---AIPFISWSDPEPFPVYYVGVCTSWGATSSLK 462
IL+ E+R FW+ W G+I G E ++W+ P P V ++G T WG+ +
Sbjct: 1028 ILSWDEFRTFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQFIGFSTGWGSMGEFR 1087
Query: 463 I 465
I
Sbjct: 1088 I 1088
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +2
Query: 71 VATDDNLQYQFF--PVSSGSVQFKVRAANDAHIALTTGPQESDPMYEVMIGGWGNAKSVI 244
++T + ++Q+ P+ VRA NDA +AL++GPQ++ M E+++GG N +S I
Sbjct: 952 ISTPNKYEFQYVQRPLRLTRFDVAVRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWI 1011
Query: 245 RKNK 256
+K
Sbjct: 1012 STSK 1015
>BC051772-1|AAH51772.1| 258|Homo sapiens DST protein protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.45
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 GGWGNAKSVIRKNKPSPIRLKLKAPEFLTEGNIVVFGFV-GIAALSPLDARVKLFHSYLG 391
GGW + KN P R K + L E I+ G G+AA P R + S G
Sbjct: 10 GGWMALDEFLVKN--DPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSR--PSSRG 65
Query: 392 LIPNLSQFTTSESAQAGVPQAP 457
PN S +S++AQA PQ P
Sbjct: 66 ASPNRSTSVSSQAAQAASPQVP 87
>BC004912-1|AAH04912.2| 258|Homo sapiens DST protein protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.45
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 GGWGNAKSVIRKNKPSPIRLKLKAPEFLTEGNIVVFGFV-GIAALSPLDARVKLFHSYLG 391
GGW + KN P R K + L E I+ G G+AA P R + S G
Sbjct: 47 GGWMALDEFLVKN--DPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSR--PSSRG 102
Query: 392 LIPNLSQFTTSESAQAGVPQAP 457
PN S +S++AQA PQ P
Sbjct: 103 ASPNRSTSVSSQAAQAASPQVP 124
>AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 33.9 bits (74), Expect = 0.45
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 GGWGNAKSVIRKNKPSPIRLKLKAPEFLTEGNIVVFGFV-GIAALSPLDARVKLFHSYLG 391
GGW + KN P R K + L E I+ G G+AA P R + S G
Sbjct: 4896 GGWMALDEFLVKN--DPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSR--PSSRG 4951
Query: 392 LIPNLSQFTTSESAQAGVPQAP 457
PN S +S++AQA PQ P
Sbjct: 4952 ASPNRSTSVSSQAAQAASPQVP 4973
>AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 33.9 bits (74), Expect = 0.45
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 GGWGNAKSVIRKNKPSPIRLKLKAPEFLTEGNIVVFGFV-GIAALSPLDARVKLFHSYLG 391
GGW + KN P R K + L E I+ G G+AA P R + S G
Sbjct: 4896 GGWMALDEFLVKN--DPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSR--PSSRG 4951
Query: 392 LIPNLSQFTTSESAQAGVPQAP 457
PN S +S++AQA PQ P
Sbjct: 4952 ASPNRSTSVSSQAAQAASPQVP 4973
>AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 33.9 bits (74), Expect = 0.45
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 GGWGNAKSVIRKNKPSPIRLKLKAPEFLTEGNIVVFGFV-GIAALSPLDARVKLFHSYLG 391
GGW + KN P R K + L E I+ G G+AA P R + S G
Sbjct: 4896 GGWMALDEFLVKN--DPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSR--PSSRG 4951
Query: 392 LIPNLSQFTTSESAQAGVPQAP 457
PN S +S++AQA PQ P
Sbjct: 4952 ASPNRSTSVSSQAAQAASPQVP 4973
>AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid antigen 1
eA protein.
Length = 5171
Score = 33.9 bits (74), Expect = 0.45
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 GGWGNAKSVIRKNKPSPIRLKLKAPEFLTEGNIVVFGFV-GIAALSPLDARVKLFHSYLG 391
GGW + KN P R K + L E I+ G G+AA P R + S G
Sbjct: 4923 GGWMALDEFLVKN--DPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSR--PSSRG 4978
Query: 392 LIPNLSQFTTSESAQAGVPQAP 457
PN S +S++AQA PQ P
Sbjct: 4979 ASPNRSTSVSSQAAQAASPQVP 5000
>AB018271-1|BAA34448.2| 1637|Homo sapiens KIAA0728 protein protein.
Length = 1637
Score = 33.9 bits (74), Expect = 0.45
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 GGWGNAKSVIRKNKPSPIRLKLKAPEFLTEGNIVVFGFV-GIAALSPLDARVKLFHSYLG 391
GGW + KN P R K + L E I+ G G+AA P R + S G
Sbjct: 1389 GGWMALDEFLVKN--DPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSR--PSSRG 1444
Query: 392 LIPNLSQFTTSESAQAGVPQAP 457
PN S +S++AQA PQ P
Sbjct: 1445 ASPNRSTSVSSQAAQAASPQVP 1466
>AF485466-1|AAL96553.1| 104|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 104
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 382 ISWSDPEPFPVYYVGVCTSWGATSSLKIEV 471
IS DPE F VYY ++WG K+E+
Sbjct: 73 ISSLDPEDFAVYYCQQRSNWGFGGGTKVEI 102
>AF485464-1|AAL96551.1| 104|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 104
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 382 ISWSDPEPFPVYYVGVCTSWGATSSLKIEV 471
IS +PE F VYY T+WG K+E+
Sbjct: 73 ISSLEPEDFAVYYCQQRTNWGFGGGTKVEI 102
>AF485458-1|AAL96545.1| 104|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 104
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 382 ISWSDPEPFPVYYVGVCTSWGATSSLKIEV 471
IS +PE F VYY T+WG K+E+
Sbjct: 73 ISSLEPEDFAVYYCQQRTNWGFGGGTKVEI 102
>BC063130-1|AAH63130.1| 298|Homo sapiens chromosome 7 open reading
frame 46 protein.
Length = 298
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 495 SCYRCSRWHFDFQGACGTPACADSDVV 415
+C +CS +H F ACG PA A VV
Sbjct: 143 TCSKCSGFHSCFTCACGQPAYAHDTVV 169
>BC026000-1|AAH26000.1| 216|Homo sapiens C7orf46 protein protein.
Length = 216
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 495 SCYRCSRWHFDFQGACGTPACADSDVV 415
+C +CS +H F ACG PA A VV
Sbjct: 97 TCSKCSGFHSCFTCACGQPAYAHDTVV 123
>AF485474-1|AAL96561.1| 104|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 104
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 382 ISWSDPEPFPVYYVGVCTSWGATSSLKIEV 471
IS +PE F VYY T WG K+E+
Sbjct: 73 ISSLEPEDFAVYYCQQRTDWGFGGGTKVEI 102
>X98093-1|CAA66719.1| 1239|Homo sapiens DNA polymerase gamma
protein.
Length = 1239
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 331 WDSGIISAGREGEAIPFISWSDPEPFPVYYVGVCTSWGATSSLKIEVPPTAPVAAC 498
W G G EGEA+P E V+ V VC + G +L + + P+A + C
Sbjct: 171 WAEGWTRYGPEGEAVPVA--IPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWC 224
>U60325-1|AAC50712.1| 1239|Homo sapiens DNA polymerase gamma
protein.
Length = 1239
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 331 WDSGIISAGREGEAIPFISWSDPEPFPVYYVGVCTSWGATSSLKIEVPPTAPVAAC 498
W G G EGEA+P E V+ V VC + G +L + + P+A + C
Sbjct: 171 WAEGWTRYGPEGEAVPVA--IPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWC 224
>D84103-1|BAA12223.1| 1241|Homo sapiens mitochondrial DNA polymerase
gamma protein.
Length = 1241
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 331 WDSGIISAGREGEAIPFISWSDPEPFPVYYVGVCTSWGATSSLKIEVPPTAPVAAC 498
W G G EGEA+P E V+ V VC + G +L + + P+A + C
Sbjct: 173 WAEGWTRYGPEGEAVPVA--IPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWC 226
>BC050559-1|AAH50559.1| 1239|Homo sapiens POLG protein protein.
Length = 1239
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 331 WDSGIISAGREGEAIPFISWSDPEPFPVYYVGVCTSWGATSSLKIEVPPTAPVAAC 498
W G G EGEA+P E V+ V VC + G +L + + P+A + C
Sbjct: 171 WAEGWTRYGPEGEAVPVA--IPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWC 224
>BC042571-1|AAH42571.1| 1239|Homo sapiens polymerase (DNA directed),
gamma protein.
Length = 1239
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 331 WDSGIISAGREGEAIPFISWSDPEPFPVYYVGVCTSWGATSSLKIEVPPTAPVAAC 498
W G G EGEA+P E V+ V VC + G +L + + P+A + C
Sbjct: 171 WAEGWTRYGPEGEAVPVA--IPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWC 224
>AF497906-1|AAM77583.1| 1240|Homo sapiens polymerase (DNA directed),
gamma protein.
Length = 1240
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 331 WDSGIISAGREGEAIPFISWSDPEPFPVYYVGVCTSWGATSSLKIEVPPTAPVAAC 498
W G G EGEA+P E V+ V VC + G +L + + P+A + C
Sbjct: 172 WAEGWTRYGPEGEAVPVA--IPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWC 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,476,379
Number of Sequences: 237096
Number of extensions: 2367071
Number of successful extensions: 6501
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6493
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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