Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40274
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 250 PIVIFLASGIPQSQFHLFSIHFDVGNVILK 161
           P+V+ L   IP    H     F V N+IL+
Sbjct: 451 PLVVVLTHLIPFMLIHQGETQFVVANIILR 480


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -3

Query: 340 TSLGCSRANPASPPRS--T*GSHPYLDTRAAQPIV 242
           T +  S+A+PA+ PRS  T    P   T A+ P V
Sbjct: 202 TKVKASKASPAAAPRSVATPTGIPTPSTSASPPTV 236


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 135 N*SLLNTISRHVLPHAPSPTIT 70
           N S  ++ SRH + H P P +T
Sbjct: 149 NYSAYSSASRHHVDHQPVPYLT 170


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 596 SSGPVMRLWLLFSNTSRT 543
           S G  ++LW +F N S T
Sbjct: 391 SEGDFIKLWDMFQNESLT 408


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 174 LPTSKWMENKWN 209
           LPT KWM+ K N
Sbjct: 194 LPTYKWMQVKRN 205


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 174 LPTSKWMENKWN 209
           LPT KWM+ K N
Sbjct: 194 LPTYKWMQVKRN 205


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 174 LPTSKWMENKWN 209
           LPT KWM+ K N
Sbjct: 194 LPTYKWMQVKRN 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,997
Number of Sequences: 336
Number of extensions: 3239
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)