Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40274
(609 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 8e-45
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 5e-18
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 80 1e-15
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 76 2e-14
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 75 6e-14
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 70 2e-12
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 56 3e-08
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 53 2e-07
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 53 2e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 52 4e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 51 6e-07
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 50 2e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 49 3e-06
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 48 5e-06
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 47 1e-05
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 47 1e-05
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 46 3e-05
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 42 3e-04
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 41 7e-04
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 41 0.001
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 39 0.004
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 39 0.004
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 39 0.004
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 38 0.006
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 38 0.006
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 38 0.006
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 37 0.011
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 37 0.015
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 37 0.015
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 36 0.026
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.026
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 35 0.045
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 35 0.045
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 35 0.045
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 34 0.10
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 33 0.18
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.18
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 32 0.32
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 32 0.32
SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5) 32 0.42
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 32 0.42
SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01) 32 0.42
SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 31 0.97
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 31 0.97
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 1.3
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 30 1.3
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 30 1.7
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 30 1.7
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 30 1.7
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 30 1.7
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_23377| Best HMM Match : WH1 (HMM E-Value=2.8) 29 2.2
SB_56000| Best HMM Match : HSA (HMM E-Value=2.8) 28 5.1
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 28 5.1
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 28 5.1
SB_6269| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=2.9) 28 5.1
SB_44854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 28 6.8
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_33077| Best HMM Match : R3H (HMM E-Value=0.38) 28 6.8
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 28 6.8
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 28 6.8
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 27 9.0
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 177 bits (430), Expect = 8e-45
Identities = 81/109 (74%), Positives = 93/109 (85%)
Frame = +1
Query: 256 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINE 435
PLSYPDTDVILMCFS+DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR D T E
Sbjct: 5995 PLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRMDENTKRE 6054
Query: 436 LRKMKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFENSNQSRI 582
L+KMKQEPVK +EGRAMA+KI+A+ K+K+GVREVFE + ++ +
Sbjct: 6055 LQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFETATRAAL 6103
Score = 144 bits (350), Expect = 4e-35
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +2
Query: 47 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 226
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 5984
Query: 227 AGQEDYD 247
AGQEDYD
Sbjct: 5985 AGQEDYD 5991
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 524 CQKARKVYVR-CLKTATRAALQVQKKKK 604
C K VR +TATRAALQ +KKKK
Sbjct: 6083 CSAKTKDGVREVFETATRAALQTKKKKK 6110
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 112 bits (269), Expect = 2e-25
Identities = 48/117 (41%), Positives = 73/117 (62%)
Frame = +1
Query: 256 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINE 435
PLSYP TDV L+CFSV SP S EN+ EKW PE+ H CP P +LVG + DLR+D TI +
Sbjct: 69 PLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDLRDDQGTIEK 128
Query: 436 LRKMKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFENSNQSRITGPEEEER 606
L K KQ+P+ + +A ++ A +++G++ VF+ + + + PE +++
Sbjct: 129 LSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFDEAILAALEPPEPQKK 185
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64
Query: 245 D 247
D
Sbjct: 65 D 65
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 88.2 bits (209), Expect = 5e-18
Identities = 41/100 (41%), Positives = 63/100 (63%)
Frame = +1
Query: 256 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINE 435
PLSYP TDV L+CF + S S ENI KW PE+ H P P ILVGNK+DLR+ +
Sbjct: 71 PLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRDLRSAQQNTSL 130
Query: 436 LRKMKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREV 555
++P+ +EG+A+A+++ + N+ +++GV++V
Sbjct: 131 SNHRSRDPITYEEGKALAKRLGMQYLENS-SLTQDGVKDV 169
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
KLV+VGDG GK+ LI + + FP Y+PTVF+NY ++I +DGK + LWDTAGQEDY
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDY 66
Query: 245 D 247
D
Sbjct: 67 D 67
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 38 TGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELAL 217
T P IR +++VGD CGKT LL + ++QF E Y TVF + +EVDG+++EL L
Sbjct: 225 TRPNGQIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTL 284
Query: 218 WDTAGQEDYD 247
WDT+G EDYD
Sbjct: 285 WDTSGHEDYD 294
Score = 73.7 bits (173), Expect = 1e-13
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +1
Query: 256 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINE 435
PLSY + D++L+CF + P + ++I EKW EV CPN P++LVG K+DLR++ +++
Sbjct: 298 PLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLRSEVNIVSK 357
Query: 436 L-RKMKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFEN 564
L K+ Q+PV E AE AF +P K+G ++ N
Sbjct: 358 LASKVCQQPVTSLE--VPAELKEAF----VVPVHKKGKKDYLTN 395
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/104 (31%), Positives = 55/104 (52%)
Frame = +1
Query: 256 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINE 435
PL Y DV ++CFSV SP S N+ KW PE++ F P PIILVG DL++ + E
Sbjct: 84 PLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKDCYKILTE 143
Query: 436 LRKMKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFENS 567
L + +P+ ++ + +K +++ ++ VF+ +
Sbjct: 144 LSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVFDEA 187
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
K VIVGDG GKT LL+ + D FP YVPT F+ Y +EV+ K + DTAGQED+
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQEDF 79
Query: 245 D 247
D
Sbjct: 80 D 80
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 74.5 bits (175), Expect = 6e-14
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 241 LRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 417
L PL Y DTDV ++CF + +P S +N+ W PE+KH+ P P+++VGNKKD+R +
Sbjct: 82 LSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHYMPETPVLVVGNKKDMRTN 140
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +2
Query: 59 RKKLVIVGDGACGKTCLLI-VFSKDQFP-EVY------VPTVFENYVADIEVDGKQVELA 214
R KL +VGD GKTC+L F + Q P +VY +P V E++ + D +
Sbjct: 8 RLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVT 67
Query: 215 LWDT 226
WDT
Sbjct: 68 YWDT 71
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/104 (40%), Positives = 56/104 (53%)
Frame = +1
Query: 256 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINE 435
PL YP+TD+ L+CF + S EN+ +W PE+ HF P VP +LVGNKKDLR P E
Sbjct: 73 PLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDLR--PKQDQE 130
Query: 436 LRKMKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFENS 567
+ V +EG+ A+ I N+ E V+EV S
Sbjct: 131 -DSHSIDFVSYEEGKEAAQNFKMQYIENS-ALLNENVKEVITTS 172
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 241
KL IVGDGA GKT L I + + FP Y+PT ++ D VDG + + L+D+AG ED
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 242 YD 247
+D
Sbjct: 68 FD 69
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Frame = +1
Query: 262 SYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND-----PAT 426
+Y + VI++CF++++P S +++ W PE+K +CP VPIILVG K D R+
Sbjct: 101 AYQNAHVIVLCFAINTPSSFKDVNAVWYPEIKKYCPRVPIILVGTKSDWRSQLNVSVVCQ 160
Query: 427 INELRKMKQE--PVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFENS 567
L K +E V P GR +A++I+A + A G +VFEN+
Sbjct: 161 NTSLSKRMRECFLVSPDMGRQVAKEIDAV-YYEASVVDMWGYHDVFENA 208
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +1
Query: 265 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG---NKKDLRND-PATIN 432
YPDTDV L+CFSV SL+++ +W PE++ FCP P +L+G N + L D ATI+
Sbjct: 136 YPDTDVFLVCFSVTLQQSLKDVVNRWVPELRRFCPVTPFLLIGTHINWRLLSEDRAATID 195
Query: 433 ELRKMKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFE 561
R+ P+ P+ G AEK A V+ +F+
Sbjct: 196 PARR----PIFPETGAMYAEKHGAVRYMECATNDATAVKGIFD 234
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +1
Query: 340 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFDIWN 519
W PEV H CPN PI+LVG K DLR+D TI++L++ K P+ +G MA++I A
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPIGYTQGLQMAKEIGAVKYLE 635
Query: 520 ALPKSKEGVR 549
+++G++
Sbjct: 636 CSALTQKGLK 645
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 241
K+++VGD GKTCL+ F+K FP PT+ ++ + ++VDG++V+L +WDTAGQE
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 242 Y 244
+
Sbjct: 69 F 69
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 265 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 417
+ DTDV +CFSV DS ++ KW EVK+ PN PII+VG K DLR +
Sbjct: 86 FSDTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDLREN 136
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLI--VFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 223
++VI+GD GKTCLL+ + + ++ ++ NYVA+I VDGK +L L D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCD 74
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 241
KL+++GD GK+ LL+ F+ D F Y+ T+ ++ + + VDGK ++L +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 242 Y 244
+
Sbjct: 70 F 70
Score = 31.5 bits (68), Expect = 0.55
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 408
R R+ Y I++ + V+ ++ ++ + W EV + C V ILVGNK DL
Sbjct: 69 RFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQ-WLEEVSEYACEGVNTILVGNKCDL 125
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 193 WKTSGTGSVGYRWPRRLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN 372
W T GT RLR PL+Y +D+IL+CF + + + E I KW PE P
Sbjct: 57 WDTEGTTEYD-----RLR---PLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPG 108
Query: 373 VPIILVGNKKDLR 411
+L+GNK D+R
Sbjct: 109 SIRVLIGNKNDIR 121
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 223
MA+ RK K+V+ GD GKT LI ++++ PT F NY +EV ++ L LWD
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYELGLEVGSQKFLLDLWD 58
Query: 224 TAGQEDYD 247
T G +YD
Sbjct: 59 TEGTTEYD 66
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 241
K++++GD GK+ L+ F D+F T+ + ++ D ++DGK+V+L LWDTAG+E
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 242 Y 244
Y
Sbjct: 72 Y 72
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 241
KL+I+G+ A GKT L ++ D F +V TV ++ V + + K+V+L +WDTAGQE
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 242 Y 244
Y
Sbjct: 83 Y 83
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 241
K++I+GD GKTCL +FPE T+ + + +E++G+ V+L LWDTAGQE
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQER 107
Query: 242 Y 244
+
Sbjct: 108 F 108
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 265 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKH--FCPNVPIILVGNKKDL 408
Y + + ++ + + S E + W E +H + +VP IL+GNK DL
Sbjct: 117 YRNVNAVVFMYDITRKCSFEALTT-WIVEYRHHAYSGDVPKILIGNKCDL 165
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
K+V++G G GK+ L + F QF E Y PT+ + Y +IEVD L + DTAG E +
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGTEQF 64
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 370 NVPIILVGNKKDLRND 417
NVPI+LVGNK D+ ++
Sbjct: 108 NVPIVLVGNKSDIYDE 123
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
KLV+VG G GK+ L I F + F Y PT+ ++Y +D + L + DTAGQE++
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEF 72
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 241
K++IVG+ GK+ LL+ F+ D F P++ + V + V+G + +LA+WDTAGQE
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 242 Y 244
+
Sbjct: 70 F 70
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 256 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 399
PL+Y D+ ++CF V + S EN+ KW PE++ + VP++LVG K
Sbjct: 91 PLAYIHADLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGLK 138
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 241
K+V++GD GK+ LL F++++F T+ + I+V+GK ++ +WDTAGQE
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 242 Y 244
Y
Sbjct: 74 Y 74
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 414
R R+ Y ++ + + + +++ E+W EV+ H P + ++LVGNK DL++
Sbjct: 73 RYRAITSAYYRGAVGAVLVYDLTKQKTFQDV-ERWLLEVREHADPTIVVMLVGNKCDLKH 131
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 62 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 241
+K+ ++G + GK+ L I F + QF + Y PT+ + +I+ G++ L L DTAGQ++
Sbjct: 7 RKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDE 66
Query: 242 Y 244
Y
Sbjct: 67 Y 67
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 241
KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQE
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 242 Y 244
Y
Sbjct: 83 Y 83
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDL 408
R S AP+ Y ++ + + + D+ + W E+ + PN+ I L GNK DL
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARA-KTWVKELQRQASPNIVIALSGNKADL 138
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 232
K+V VGD GKT L + FP ++ ++F+ Y +E+DGK+ + L DT G
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPG 66
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/92 (32%), Positives = 47/92 (51%)
Frame = +1
Query: 280 VILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 459
V L+CF + + +S NI W P V +VP +LVGNK +LR +L + +
Sbjct: 83 VFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELRCSQQESTDLGQ-THDC 141
Query: 460 VKPQEGRAMAEKINAFDIWNALPKSKEGVREV 555
V E +A+A K N + N+ K +G+ +V
Sbjct: 142 VPFTEAKALACKSNIPYVENS-AKELKGLEDV 172
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGK-QVELALWDTAGQE 238
+++++GD GK+ LL F++ QF E PTV + +V +E+ G +++L +WDTAGQE
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74
Query: 239 DY 244
+
Sbjct: 75 RF 76
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 340 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP-----VKPQEGRAMAEKINA 504
W PE+K CP VP +L+G K DLR D A + EP + A A+ I A
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSALELNFLSVPGEPDNADSISRLRAIATAQSIGA 60
Query: 505 FDIWNALPKSKEGVREVFENSNQS 576
K + ++EVF+ + ++
Sbjct: 61 RQYVECCAKMRWNIKEVFQQAAEA 84
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 241
K+V +GD GK+ L F D F E Y PT+ +++ + +D +V L +WDTAGQE
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 242 Y 244
+
Sbjct: 225 F 225
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 241
K+V +GD GK+ L F DQ+ + T+ ++ + + V+G+ + + LWDTAGQE
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQER 957
Query: 242 Y 244
+
Sbjct: 958 F 958
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 22/82 (26%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFS---------------------KDQFPEVYVPTVFENY-VA 178
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 179 DIEVDGKQVELALWDTAGQEDY 244
IE+DGK ++L +WDTAGQE +
Sbjct: 70 TIELDGKTIKLQIWDTAGQERF 91
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 408
R R+ Y I++ + V +S N+ ++W E+ + C NV +LVGNK DL
Sbjct: 90 RFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYACENVNKLLVGNKCDL 146
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 241
K+V+ GD A GK+ ++ +++F T+ ++ + + VDGK L LWDTAGQE
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQER 503
Query: 242 Y 244
+
Sbjct: 504 F 504
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRN 414
R RS A + D +L+ + V S ++ + W ++ C VPI+L GNK D+R
Sbjct: 503 RFRSIAKSYFRKADGVLLLYDVTCETSFLDVRD-WVEAIEESCSKPVPIMLCGNKIDIRQ 561
Query: 415 DPATINE 435
A N+
Sbjct: 562 SAAAENK 568
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 232
K+ I+G G GKT LL F +F E +VPTV + ++ + +DG + DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAG 69
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQED 241
K+++VGD GKT L+ F+K F + TV + + ++ G +V+L WDTAGQE
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 242 Y 244
+
Sbjct: 73 F 73
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 414
+ R Y + D +++ F + + + +IP+ W V+ + N+ +LVGNK DL+
Sbjct: 72 KFRGITQSYYRNADAVILVFDITNRGTFASIPQ-WLMNVQKYTNKNILKVLVGNKTDLKG 130
Query: 415 DPATIN 432
+N
Sbjct: 131 ASRKVN 136
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 235
K+VI+G+ GK+ L + F +F Y T+ Y D EV G+ V + L DTAG+
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGE 919
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 235
++ ++GD GKT LL+ F +F Y PT+ + Y I +D V L + DTA +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASR 63
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +2
Query: 59 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 229
R KL +VGD GKT LL K EV +FE V D+ +E LWD++
Sbjct: 61 RYKLSVVGDAESGKTSLLNALVKSDI-EVEETVIFEECVTDVTSGDSNLEFMLWDSS 116
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDT 226
K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTA 229
K+V++GD GK+ LL ++K++F T+ E ++E++GK V +WDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 LSALYCFTGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVD 193
++ LY GP+ K+V++G+ GKT L ++ F T+ ++ +++
Sbjct: 1 MADLYAERGPLF----KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIG 56
Query: 194 GKQVELALWDTAGQEDY 244
KQV L++WDTAG E +
Sbjct: 57 EKQVTLSVWDTAGVERF 73
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 286 LMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 414
++ F V S + +N+P W +++ C N+PI+L GNK D+++
Sbjct: 109 IIMFDVTSRVTYKNVPN-WHRDLERVCENIPIVLCGNKVDIKD 150
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 77 VGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQEDY 244
VGDG GKT + +F + Y+ T+ E + ++ +WDTAGQE +
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKF 94
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
KL+++GD GKTC+L FS D F ++ T+ EN + + E L+ ++
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI-ENVLLNTLAHTLNFERTLFRHGNSGNF 69
Query: 245 D 247
D
Sbjct: 70 D 70
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 83 DGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQEDY 244
DG GK+ L+ F +F T+ ++ D+++DG+ L +WDTAGQE +
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERF 273
Score = 32.3 bits (70), Expect = 0.32
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-----NVPIILVGNKK 402
R +S Y +D+ L+ ++VD S N+ W E ++ N P IL+GNK
Sbjct: 272 RFKSLRTPFYRGSDLCLLVYAVDDAKSFTNL-SMWKKEFLYYADVRDQDNFPFILLGNKV 330
Query: 403 DLRNDPATINELRK-MKQEPVKPQEGRAMAEKINAFDIWNALPKSKEGVREVFENSNQSR 579
D+ + E +Q P + + N D + A K + + N +
Sbjct: 331 DVEGRAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRLNSLEQNKANRSGFT 390
Query: 580 ITG 588
TG
Sbjct: 391 ATG 393
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FE---------NYVADIEVDGKQVE 208
K + +GD GKT LL ++ F +VPT+ F N + G+++
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 209 LALWDTAGQEDY 244
L LWDTAGQE +
Sbjct: 168 LQLWDTAGQERF 179
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 405
R R+ Y T +++ + V S D+ N+ ++W E+ C +V ILVGNK D
Sbjct: 38 RFRTITSTYYRGTHGVIVVYDVTSADTFVNV-KRWLHEIDQNCDDVIRILVGNKDD 92
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 134 FPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDY 244
F Y+ T+ ++ + I +DG++V+L +WDTAGQE +
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERF 39
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 238
K+ + G GKT + S D+FPE + + + ++ + + K++++ LWDT G E
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 239 DYD 247
+Y+
Sbjct: 70 EYE 72
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 SAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 405
S PL Y ++ F V S E +P W +V+ C + +P++LVGNK D
Sbjct: 37 STVPLIYRALSGAVIVFDVTDRKSFERVPT-WLDKVQEHCGHEIPVVLVGNKTD 89
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 38 TGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK-QVELA 214
T P A R +V++G G GKT L+ F F E Y PTV + Y + + L
Sbjct: 102 TLPAAVFR--VVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLE 159
Query: 215 LWDTAG 232
+ DTAG
Sbjct: 160 IMDTAG 165
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 259 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 408
L+ + D ++ +SVD SL+ E V VP++LVGNK DL
Sbjct: 175 LTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 414
R RS Y L+ + + S ++ ++ W + + PN+ IILVGNKKDL
Sbjct: 156 RFRSVTRSYYRGAAGALLVYDISSRETFNSLTN-WLTDARTLASPNIVIILVGNKKDLDA 214
Query: 415 D-PATINELRKMKQE 456
D T E + QE
Sbjct: 215 DREVTFLEASRFAQE 229
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 182 IEVDGKQVELALWDTAGQEDY 244
+ V GK V+L +WDTAGQE +
Sbjct: 137 VNVGGKSVKLQIWDTAGQERF 157
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVP-TVFENYV--ADIEVDGKQVELALWDTAGQ 235
K +I+G+ GK+CL+ F +V TV N + D K+++L + DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 236 EDY 244
E Y
Sbjct: 412 ERY 414
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 226
K+ I+G A GKT L+ K F ++PT+ + + + DG + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 59 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 238
R +V G + GKT L++ F F + Y PT+ + ++ + + + EL + DT+G
Sbjct: 28 RFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSGTY 87
Query: 239 DY 244
++
Sbjct: 88 EF 89
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRN 414
R R+ Y + +++ + + D+ +N+ +W +V+ + P I +LVGNKKDL
Sbjct: 107 RFRTITQSYYRSCNGVIIAYDITKCDTFKNVI-RWGEDVQKYAPENAIKLLVGNKKDLER 165
Query: 415 D 417
+
Sbjct: 166 E 166
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 172
K+V++G G GK+ L + F QF E Y PT+ + Y
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY 40
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 370 NVPIILVGNKKDLRND 417
NVPI+LVGNK D+ ++
Sbjct: 92 NVPIVLVGNKSDIYDE 107
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 68 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 229
LV++G GK+ LL+ F +F Y PT+ Y +D L + DTA
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA 183
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 286 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 414
L+ + + + EN+ E+W E++ H N+ I+LVGNK DLR+
Sbjct: 10 LLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 52
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 265 YPDTDVILMCFSVDSPDSLENIPEK 339
Y DTDV L+CF + +P SL+++ +K
Sbjct: 13 YLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +2
Query: 20 SALYCFTGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 199
S L F + +L++VG A GKT +L D+ P +PT+ N V+ K
Sbjct: 77 SVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV---VEYK 132
Query: 200 QVELALWDTAGQE 238
++ +WD GQ+
Sbjct: 133 NIKFTVWDIGGQD 145
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 47 MAAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTV 160
M +R K+++ GD GK+ L+ VF D +P+ Y TV
Sbjct: 1 MVVLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV 40
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 191 DGKQVELALWDTAGQEDYD 247
+G+ + L LWDTAGQE++D
Sbjct: 30 NGEDIRLMLWDTAGQEEFD 48
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 50 AAIRKKLVI--VGDGACGKTCLLIVFSKDQFPEVYVPTVFE 166
+A KKL I +G+G GK+ L+ F + F E YVPT+ E
Sbjct: 22 SAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEE 62
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRN 414
R R+ Y +++ + + +S N+ KW EV+ + V +ILVGNK DL
Sbjct: 380 RFRTITSSYYRGAHGVMIVYDITKRESYNNL-HKWLMEVETYASEGVHMILVGNKIDLDT 438
Query: 415 D 417
D
Sbjct: 439 D 439
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
+L +VG G GK+ + I + K++F E I+ GK ++ + DTAGQE+Y
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTE-------------IDYCGKLYDIEVVDTAGQEEY 2646
>SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5)
Length = 144
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 47 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ---VELAL 217
MAA + + +VG G G T L + +D P V V + +++ D DG + L
Sbjct: 1 MAASARSVAVVGCGCIGITAALSILERD--PCVRVTIISDSFSPDNTTDGAAGILLPFVL 58
Query: 218 WDT 226
WDT
Sbjct: 59 WDT 61
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 68 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 235
+ ++G GK+ + +F Y P + NY +E+DG+ + L + DTAG+
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGK 239
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 235
+L +VG GKT + V + QF E +PTV N +V V + +WD GQ
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM---RKVSKGNVTIKVWDIGGQ 75
>SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01)
Length = 1062
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 172 RCRHRSGWKTSGTGSVGYRWPRRLR-SAAPLSYPDTDVILMCFSVDSPD-SLENI 330
R R+R GW + T + +R RR R S A ++ DTD L ++ P+ SLE++
Sbjct: 970 RRRYRLGWAQAATKNPDWRAHRRERGSLAKQNFTDTDYALRLYNQTRPEQSLESM 1024
>SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 31.5 bits (68), Expect = 0.55
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 382 ILVGNKKDLRNDPAT--INELRKMKQEPVKPQEGRAMAEKI-----NAFDIWNALPKSKE 540
I V K D + P T I+ L+ + VKP+EG A AE+I NA + P+S
Sbjct: 256 IKVEGKSDNKTQPTTNGIDLLQNQQTNDVKPKEGSAKAEEIGSVIPNAGMTSGSEPQSAV 315
Query: 541 GVREVFENSNQSRITGPEEEERL 609
+ ++ R+ E EE+L
Sbjct: 316 SIVTANKDVESLRVGSGETEEQL 338
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 31.1 bits (67), Expect = 0.73
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +1
Query: 283 ILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 459
IL+ + + + DS ++I + W ++ + PNV +L+GNK D + +
Sbjct: 5 ILLVYDITTEDSFKHISQ-WLQNIEDNASPNVCKVLLGNKLDAED------------ERV 51
Query: 460 VKPQEGRAMAEKINAFDIWNALPKSKEGVREVF 558
+ Q GR++ E N + + A ++ E V++ F
Sbjct: 52 IDAQRGRSVGED-NNLEFYEASARTGENVQQAF 83
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 414
R R+ Y ++ + + S N+ KW E++ H ++ IIL+GNK DL++
Sbjct: 4 RYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLKH 62
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 30.7 bits (66), Expect = 0.97
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-----HFCPNVPIILVGNKK 402
R S + Y D ++ F ++ +L+ KW ++ H VP ILVGNK
Sbjct: 80 RFSSMTRVYYKGADACVVLFDLERQTTLDGAI-KWKKDLDSKYKLHSRKPVPCILVGNKS 138
Query: 403 DLRNDPATINELRKMKQE 456
DL + P + K+ +E
Sbjct: 139 DLPDRPVDKEIIDKLCKE 156
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 414
R R+ Y ++ + + S N+ KW E++ H ++ IIL+GNK DL++
Sbjct: 4 RYRAITSAYYRGAMGAVLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLKH 62
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPT 157
K+VI GD GKTC+ F E Y+PT
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 244
++ + G GKT ++ F +F E Y PTV + Y + +G + L D++G +
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQF 69
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 194 GKQVELALWDTAGQEDY 244
GK+++L +WDTAGQE +
Sbjct: 2 GKKIKLQIWDTAGQERF 18
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 35 FTGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELA 214
F G ++++VG A GKT +L + +PT+ N V+ K +
Sbjct: 9 FAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFT 64
Query: 215 LWDTAGQE 238
+WD GQ+
Sbjct: 65 VWDVGGQD 72
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 286 LMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL-RNDPATINELRKMKQEPV 462
++ + + SL+ + ++ ++ PN +++VG KKDL +D I E M+ V
Sbjct: 300 IVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCKKDLVTDDTREITEAAGMELAKV 359
Query: 463 KPQEGRAMAEKINAFDIWNALPKSKEGVREVFE 561
+ + + + K+ +GV VFE
Sbjct: 360 QNELKSRSLLSLKRTPFFETSSKTGDGVDNVFE 392
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +1
Query: 238 RLRSAAPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKK 402
R +S Y D ++ F V P+S + + + W E + P N P +++GNK
Sbjct: 9 RFQSLGVAFYRGADCCVLVFDVTQPNSFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 67
Query: 403 DLRN 414
DL N
Sbjct: 68 DLEN 71
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 35 FTGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELA 214
FT + ++++VG A GKT +L + +PT+ N + V+ K +
Sbjct: 9 FTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVES---VEYKNISFT 64
Query: 215 LWDTAGQE 238
+WD GQ+
Sbjct: 65 VWDVGGQD 72
>SB_23377| Best HMM Match : WH1 (HMM E-Value=2.8)
Length = 355
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 587 PVMRLWLLFSNTSRTPSLLFGRAFQISNALIFSAIARPSCGFTGSCFILRSSLMV 423
P R WL+FS+T+R+ S + +A Q N S PS CF L +S +V
Sbjct: 23 PSYRRWLIFSHTTRSVSRHYIKAVQYDNQFRSS----PSSVSLSICFYLFASNIV 73
>SB_56000| Best HMM Match : HSA (HMM E-Value=2.8)
Length = 410
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 208 FHLFSIHFDVGNVILKHCRHVYFRELIL--AEHYQQTCFTACTVTDDY*LFAYR 53
FHL +H +V + RH++ R ++ A + C TA +T D LF+ R
Sbjct: 286 FHLVGMHSNVFTRTARLPRHLFHRRKVIEFALWIRDCCITAALLTRDGCLFSAR 339
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 65 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 238
++V++G A GKT +L + +PT+ N V ++ K V L +WD GQ+
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVST-IPTIGFN-VETLQPT-KNVTLTIWDVGGQD 75
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 382 ILVGNKKDLRN--DPATINELRKMKQ-EPVKPQEGRAMAEKINAFDIWNALPKSKEGVRE 552
I G KK L+ +P ++ L K+ + + E + K A I LP++K+ +E
Sbjct: 586 ISTGEKKPLKAALNPLDMSRLPKIHPPDDEQVDEDNNIKNKTTAKKIEEPLPRTKKPEKE 645
Query: 553 VFENSNQSRITGPEEEE 603
E+ +S EEEE
Sbjct: 646 EEESEEESEEESEEEEE 662
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 286 LMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRNDPATINELRKM 447
L F+V++ S E+I ++ ++K VP++LVGNK DL + ++ +++
Sbjct: 305 LCVFAVNNSKSFEDI-NQYREQIKRVKDAEEVPMVLVGNKCDLPQRTVSTSDAQEL 359
>SB_6269| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=2.9)
Length = 107
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 394 NKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFD 510
N + RNDP + K+KQ + QE A+ +K++ +D
Sbjct: 66 NSLNRRNDPTNTHVADKLKQIEQEEQEDEAVFDKLSNWD 104
>SB_44854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 564 VFKHLTYTFLAFWQSIPDIKRVNLFSHS 481
+FK LTYTF W S P+I R + S
Sbjct: 361 IFKALTYTFAGIWMS-PEIHRRTRYDKS 387
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 367 GRSALPQGSTSLGCSRANPASPPRST*GSHPYLDTRAAQ 251
G SA GST G A PP T S P L +A +
Sbjct: 1671 GPSAAKPGSTKSGTLSAKTGEPPSRTPASRPALQKKAEE 1709
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 29 YCFTGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 160
+ F M+ I K++IVGD GKT + + Y PT+
Sbjct: 12 FAFGSTMSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_33077| Best HMM Match : R3H (HMM E-Value=0.38)
Length = 332
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 394 NKKDLRNDPATINELRKMKQ-EPVKPQEGR 480
NK+DLR+ T+N++RK K+ P + EG+
Sbjct: 296 NKRDLRSIEETLNDIRKRKRHRPNEDGEGQ 325
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 59 RKKLVIVGDGACGKTCLLIVFSK 127
+K LV+ GD CGKT L+ + +K
Sbjct: 383 QKPLVLYGDSGCGKTSLVAMTAK 405
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 373 VPIILVGNKKDLR 411
+PI+LVGNK+DLR
Sbjct: 71 IPIVLVGNKRDLR 83
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = +1
Query: 370 NVPIILVGNKKDLRN-----DPATINELRKMKQEPVKPQEGRA 483
+VP+++V NK+DL N D A L K+K+ P+ QE A
Sbjct: 71 DVPVVVVANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFA 113
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 68 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN 169
+V++G GKT L++ F +F Y PT+ E+
Sbjct: 327 MVVLGAAGVGKTALVVRFVTGRFLNEYDPTLGEH 360
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,400,996
Number of Sequences: 59808
Number of extensions: 424505
Number of successful extensions: 1470
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -