Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40273
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.4  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +2

Query: 23  FPHCVLYVYSQCCHSI*SSPMQSQCDW*ATVISRNITETLRVLFNCVHSFKV 178
           F  C++ + +QC   I S  +++  D   T   RN+ E+ ++   C+  + V
Sbjct: 189 FYTCLIQIETQC--EIVSDTLRN-LDKIVTNGFRNVAESRKIFIECIEQYNV 237


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 174 LKLCTQLNNTLKVSVIFLLIT 112
           L +C Q  NT++ S IF L+T
Sbjct: 284 LYICNQCYNTVEESRIFGLVT 304


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 348 CHSSSLNSDMRIVYHSN 298
           CH  SL+SD + + H N
Sbjct: 334 CHPLSLSSDHQAMLHHN 350


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 67  AVTALGIYI*HTMWKTFYYLNY 2
           A TA  IY+ HT ++  Y + +
Sbjct: 56  AGTAYSIYVRHTYYRRLYTITH 77


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 67  AVTALGIYI*HTMWKTFYYLNY 2
           A TA  IY+ HT ++  Y + +
Sbjct: 56  AGTAYSIYVRHTYYRRLYTITH 77


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 181 LLF*SVWPVNKPECLNFLFALVDE 252
           L F + W  N PE L+     VDE
Sbjct: 422 LYFHAAWLKNNPEFLDAFLYWVDE 445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,377
Number of Sequences: 336
Number of extensions: 3691
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)