Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40273
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.89 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.89 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    25   0.89 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.6  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    23   3.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.3  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 399 WIIYYLHHTL-SEHG*IITLFPWT 467
           W  YY++HTL +E    +TL  WT
Sbjct: 172 WDYYYIYHTLVAEQSYGLTLPSWT 195


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 399 WIIYYLHHTL-SEHG*IITLFPWT 467
           W  YY++HTL +E    +TL  WT
Sbjct: 187 WDYYYIYHTLVAEQSYGLTLPSWT 210


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 399 WIIYYLHHTL-SEHG*IITLFPWT 467
           W  YY++HTL +E    +TL  WT
Sbjct: 75  WDYYYIYHTLVAEQSYGLTLPSWT 98


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query: 295 LAVSWL-YPWQW 263
           L+V W  YPWQW
Sbjct: 91  LSVFWQQYPWQW 102


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 4   NLNSKMFSTLCAICIFPMLS 63
           N+N+++F T C +  FP  S
Sbjct: 69  NINNQLFQTPCELLNFPKRS 88


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 550 NTR-WDITIKQWQLFRFHP--GDFNMSIKPDHGLDSYLGLILGP*KFN 684
           N+R W IT     LF  +P  G FN+       +D  LGL LGP + N
Sbjct: 215 NSRSWRITNN---LFYPYPPYGTFNIKGDTFDLMDGILGLALGPIRNN 259


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,053
Number of Sequences: 438
Number of extensions: 4294
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)