Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40272
         (592 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1; T...    33   6.6  
UniRef50_Q9ZE03 Cluster: OUTER MEMBRANE PROTEIN OMP1; n=10; Rick...    32   8.7  
UniRef50_Q2B9L9 Cluster: YuxH; n=1; Bacillus sp. NRRL B-14911|Re...    32   8.7  

>UniRef50_A2AX81 Cluster: Gustatory receptor candidate 19; n=1;
           Tribolium castaneum|Rep: Gustatory receptor candidate 19
           - Tribolium castaneum (Red flour beetle)
          Length = 355

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 208 VEYNKHEIEI*CKIYKNS*SLFYCILIVFIVNFLFNYGHDY*EYTKILVLC 360
           + +N H + + C  Y     LFYC  I+F V+FL    + Y  Y  I++LC
Sbjct: 64  ITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFY--YAFIILLC 112


>UniRef50_Q9ZE03 Cluster: OUTER MEMBRANE PROTEIN OMP1; n=10;
           Rickettsia|Rep: OUTER MEMBRANE PROTEIN OMP1 - Rickettsia
           prowazekii
          Length = 768

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 163 YLRSGTSEFESLKFRVEYNKHEIEI*CKIYKN 258
           YL SGT EF  +    +Y KHEIE  CK YK+
Sbjct: 581 YLVSGTQEFAGVGGDNKYIKHEIE--CKFYKS 610


>UniRef50_Q2B9L9 Cluster: YuxH; n=1; Bacillus sp. NRRL B-14911|Rep:
           YuxH - Bacillus sp. NRRL B-14911
          Length = 414

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +2

Query: 338 IQKYWYYVKVLEEPMPSNKLPKKGIKICLKQAAQA*TILMISKIFIINSKCF 493
           IQK+ Y + V E  +    + K+ I+ICL +A  A ++ ++ K   +N++ F
Sbjct: 269 IQKWIYVLAVRESTLEKKAVQKETIRICLIRAKMAESVAVLRKKGALNAQYF 320


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,971,119
Number of Sequences: 1657284
Number of extensions: 9276558
Number of successful extensions: 16737
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16735
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)