Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40271
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical ...   128   2e-30
AC199170-2|ABO33261.1|  167|Caenorhabditis elegans Hypothetical ...   104   6e-23
Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical pr...    33   0.22 
Z34802-3|CAA84333.1|  354|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical
           protein Y60A3A.9 protein.
          Length = 211

 Score =  128 bits (310), Expect = 2e-30
 Identities = 64/120 (53%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = +2

Query: 224 VVSSLFVGRN-VSFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAPK 400
           ++S L+      +FTS+TPGEHVIC+YSNST+WF+G+QLRVHLDIQ G+HA DYA +A K
Sbjct: 75  ILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQDYAQIAQK 134

Query: 401 GKLTELQLRIRQLLGQVHQITKXXXXXXXXXXXXXXXXXAPTSGCSWWSLLQTGVLVIIG 580
            KL ELQLRIRQLL QV QITK                 +  S   +WS+ Q  VL I G
Sbjct: 135 DKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQVVVLAITG 194



 Score =  104 bits (250), Expect = 5e-23
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = +3

Query: 24  LADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVR 203
           LA  A +LYFHIAE E+KCFIEEIPD+T V  NYKV+LYDP + G+    P IGMHVEV+
Sbjct: 10  LATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGY-GDYPNIGMHVEVK 68

Query: 204 DPNDRILLSRVYSLEG 251
           DP D+++LS++Y+ EG
Sbjct: 69  DPEDKVILSKLYTAEG 84


>AC199170-2|ABO33261.1|  167|Caenorhabditis elegans Hypothetical
           protein T08D2.1 protein.
          Length = 167

 Score =  104 bits (249), Expect = 6e-23
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = +3

Query: 24  LADCASALYFHIAEGERKCFIEEIPDDTTVIVNYKVELYDPKSGGFMQTTPGIGMHVEVR 203
           LA  A +LYFHIAE E+KCFIEEIPD+T V  NYKV+LYDP + G+    P IGMHVEV+
Sbjct: 10  LATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGY-GDYPNIGMHVEVK 68

Query: 204 DPNDRILLSRVYSLEG 251
           DP D+++LS++Y+ EG
Sbjct: 69  DPEDKVILSKLYTSEG 84



 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +2

Query: 224 VVSSLFVGRN-VSFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAPK 400
           ++S L+      +FTS+TPGEHVIC+YSN+T+WF+G+QLRVHLDIQ G+HA DYA V  +
Sbjct: 75  ILSKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDIQAGDHAQDYAQVEEE 134

Query: 401 GKLTE 415
            KL E
Sbjct: 135 RKLDE 139


>Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical
           protein F47G9.1 protein.
          Length = 204

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = +2

Query: 257 SFTSSTPGEHVICMYSNSTSWFSGSQLRVHLDIQVGEHAVDYANVAPKGKLTELQLRIRQ 436
           +FT+       IC+ ++  +   G +  V L ++ G  A +Y ++A   KL  L++ +R+
Sbjct: 79  AFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYDDIAKAEKLKPLEVELRR 138

Query: 437 LLGQVHQITK 466
           L      ITK
Sbjct: 139 LEDMADSITK 148


>Z34802-3|CAA84333.1|  354|Caenorhabditis elegans Hypothetical
           protein M88.3 protein.
          Length = 354

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -3

Query: 256 DIPSNE*TRDNSILSFGSRTSTCMPMPGVVCMNPP 152
           D  SNE   +NS+LS  S  S+ +P+PG++ + PP
Sbjct: 3   DFNSNE--TNNSLLSSASSFSSFLPVPGILELIPP 35


>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
           protein C09F9.2 protein.
          Length = 1642

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 239 FVGRNVSFTSSTPGEHVICMYSNSTS 316
           F GRNV+ TSS+P   +  + +N+TS
Sbjct: 284 FAGRNVATTSSSPSSTISSIITNATS 309


>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
           protein W05B2.2 protein.
          Length = 1278

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 187 CTLKSAIRMIEYCCLESIRWKECL 258
           CT  S+IRM+ +CC + +R  +CL
Sbjct: 752 CTY-SSIRMLYFCCRDIVRIDKCL 774


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,054,800
Number of Sequences: 27780
Number of extensions: 322369
Number of successful extensions: 841
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)