Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40270
         (358 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   2.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   3.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   3.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   6.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   8.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   8.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 350 TYIYLIVFIPS-FIVLYISLRKERALIRRYRLLMHFCSH 237
           +Y+++++ + S F+ LY  LRK  A I   RL+  F  +
Sbjct: 217 SYVFVVIDVFSKFLKLY-PLRKATAKIAAKRLIEDFSGY 254



 Score = 21.0 bits (42), Expect = 3.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 128 QGPTSPKACSHIGSVV 81
           QGP +P    HIG +V
Sbjct: 186 QGPLTPILYDHIGDLV 201


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/12 (75%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = -2

Query: 102 LAYRL-RCWLIT 70
           L YRL RCWLI+
Sbjct: 217 LLYRLLRCWLIS 228


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/12 (75%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = -2

Query: 102 LAYRL-RCWLIT 70
           L YRL RCWLI+
Sbjct: 217 LLYRLLRCWLIS 228


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -1

Query: 196 LRK*ILHTSSSPGCTNIV*SRRHKGPH 116
           LRK  +H+   PGC  +     H   H
Sbjct: 309 LRKKNIHSCHIPGCGKVYGKTSHLKAH 335


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -1

Query: 202 GSLRK*ILHTSSSPGCTNIV*SRRHK 125
           GSL        SS GC+  V   RHK
Sbjct: 340 GSLYHISFMACSSAGCSQKVAEERHK 365


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -2

Query: 333 SFYTKLHRFIHQLEKRACVNSKVSVTYAFL 244
           + + KL    H +    CV   + +T AF+
Sbjct: 266 ALHIKLTDTAHMINYAFCVQQLLRITVAFI 295


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -2

Query: 333 SFYTKLHRFIHQLEKRACVNSKVSVTYAFL 244
           + + KL    H +    CV   + +T AF+
Sbjct: 266 ALHIKLTDTAHMINYAFCVQQLLRITVAFI 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,840
Number of Sequences: 336
Number of extensions: 1834
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)