Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40270
(358 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-14
SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28) 64 4e-11
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 4e-09
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 54 3e-08
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 54 3e-08
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 52 2e-07
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 4e-04
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15) 31 0.36
SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026) 29 1.5
SB_29596| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 2.6
SB_28930| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_1682| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.4
SB_30369| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_21441| Best HMM Match : zf-A20 (HMM E-Value=2.2) 27 4.5
SB_11120| Best HMM Match : DUF1080 (HMM E-Value=0.082) 27 4.5
SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07) 27 5.9
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 74.9 bits (176), Expect = 2e-14
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +1
Query: 121 GPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKC 252
GPC AYF+ + YNQ ++KC++F+YGGCQGN N F + AECE+KC
Sbjct: 232 GPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKAECEKKC 275
>SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28)
Length = 65
Score = 63.7 bits (148), Expect = 4e-11
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1
Query: 115 DVGPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKC 252
D GPC AY + + E K+C+EFIYGGC GN+NRF T EC++ C
Sbjct: 17 DPGPCKAYMPRFYFEIEKKECQEFIYGGCGGNENRFFTKRECQRIC 62
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 57.2 bits (132), Expect = 4e-09
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +1
Query: 82 TTEPICEQAFGDVGPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKCI 255
+ + IC+ + G C + LY +N + CE+F Y GC+GN NRF T+ +C++KC+
Sbjct: 677 SAKEICDLP-AEAGSCDGHMPLYFHNSTSGLCEKFHYSGCEGNANRFPTMRKCQRKCM 733
Score = 54.0 bits (124), Expect = 3e-08
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 121 GPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKC 252
GPC A F + Y+ + +C+ F YGGCQGN N F + A C +KC
Sbjct: 633 GPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKAACLKKC 676
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 130 GAYFKL-YSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKCISNRYLR 273
G FK+ + YN + CE F+Y G GN N F C++ C+ + R
Sbjct: 214 GFAFKVHFFYNAAKRLCEPFVYSGMGGNKNNFKDKDACQRACMHSEVER 262
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 55.6 bits (128), Expect = 1e-08
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +1
Query: 73 DEPTTEPICEQAFGDVGPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKC 252
++P T+ +CE+ + C ++ +S+N +T +C++ Y GC GN N F+T EC+ C
Sbjct: 2365 EDPATDSVCERMWQSP-KCTSHLPKFSFNSQTGQCQQLAYNGCLGNLNNFDTAEECQNTC 2423
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 54.4 bits (125), Expect = 3e-08
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 121 GPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKCI 255
G C A ++ YN+ T +C+ F YGGC GN NRF + +C+++C+
Sbjct: 2129 GRCRARMVMWFYNKRTGRCQTFNYGGCGGNGNRFRSRRQCQRRCV 2173
>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 54.4 bits (125), Expect = 3e-08
Identities = 28/79 (35%), Positives = 37/79 (46%)
Frame = +1
Query: 79 PTTEPICEQAFGDVGPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKCIS 258
P IC+ GPC A + YN + +C FIYGGC GN N F+T EC+ C+
Sbjct: 19 PDWSVICKMPAA-AGPCRAAMPQWYYNFKRHRCIRFIYGGCGGNPNNFDTKNECKSACMR 77
Query: 259 NRYLRINARSFLKLMYKTM 315
+ R + S TM
Sbjct: 78 KKGPRPTSSSATLTSANTM 96
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 54.4 bits (125), Expect = 3e-08
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 118 VGPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKCIS 258
VG C A ++ YN++ +C F YGGC GN NRF T CE++C++
Sbjct: 2060 VGRCRALMWMWYYNKKKGRCIRFAYGGCGGNPNRFKTKKACERRCMT 2106
>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
Length = 750
Score = 51.6 bits (118), Expect = 2e-07
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +1
Query: 121 GPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKC 252
GPC F + Y+ C EF+YGGC GN N+F++ +EC + C
Sbjct: 509 GPCRGAFPKWYYSTADNACHEFLYGGCGGNANKFDSKSECLEVC 552
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 43.6 bits (98), Expect = 5e-05
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 121 GPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNT 228
GPC A + + YN + KC+ F++GGC N N F T
Sbjct: 1241 GPCMASIERFYYNAKIGKCQSFVFGGCLPNGNNFKT 1276
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 115 DVGPCGA--YFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKC 252
D G CG + + +++ C+ F+Y GC GN NRF T +CE C
Sbjct: 216 DYGTCGFKNFVVRWYFDKAAGICKPFVYSGCGGNTNRFVTKRKCEAFC 263
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 40.3 bits (90), Expect = 4e-04
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 121 GPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKC 252
G C + + Y+ KC F+Y GC GN+N F +C + C
Sbjct: 3163 GSCSRFTVRWFYDTNRGKCAPFVYTGCGGNENNFMNEQKCLETC 3206
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 97 CEQAFGDVGPCGAYFKLYSYNQETKKCEEFIYGGCQGNDNRFNTLAECEQKCIS 258
CE+ + + + Y Y+ +++C++ + GC GN N F+T+ C + CI+
Sbjct: 568 CEKIWAPDSCASSEMRAY-YDVTSRQCKQTEFWGCNGNHNLFSTVDSCSKTCIT 620
>SB_16817| Best HMM Match : zf-CCCH (HMM E-Value=0.15)
Length = 794
Score = 30.7 bits (66), Expect = 0.36
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 157 NQETKKCEEFIYGGCQGNDN-RFNTLAECEQKCISNRYLRINARSFLKLMYKTMKLGIKT 333
N+ K+ +E+I G C N + NTL + C + YL +N L+L M + + T
Sbjct: 73 NENIKRAKEYITGVCYSEKNPKTNTLDSID--CQAPIYLTVNRERLLELGKSNMAVAVAT 130
>SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026)
Length = 284
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 79 PTTEPICEQAFGDVGPCGAYFKLYSYNQETKKCE 180
PTT + QA G G +Y N E CE
Sbjct: 196 PTTTQVSTQALSTAGGTGCVLMVYGLNHEKMNCE 229
>SB_29596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 166 TKKCEEFIYGGCQGNDNRFNTLA 234
TK C+ F GGC ND+R LA
Sbjct: 13 TKNCKAFKSGGCPYNDSRLKGLA 35
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 202 QGNDNRFNTLAECEQKCISNRYLRINARSF 291
QGN +R+NT+ I+ RYLRI+ R++
Sbjct: 2627 QGNYDRYNTVVRRISPHINCRYLRIHPRTW 2656
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 205 GNDNRFNTLAECEQKCISNRYLRINARSFLKLM 303
GN ++++T+ E I RY+RIN RS+ M
Sbjct: 2164 GNRDQYSTVTESINPPILARYVRINPRSWYARM 2196
>SB_28930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 166 TKKCEEFIYGGCQGNDNRFNTLAECEQKCISNRYLRINARS 288
TKK EEF++G Q N F+TL K + Y NA S
Sbjct: 342 TKKGEEFVWG--QEQQNAFDTLKRDLSKANTLAYFDKNAES 380
>SB_1682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 166 TKKCEEFIYGGCQGNDNRFNTLA 234
TK C+ F GGC ND R LA
Sbjct: 21 TKNCKAFKSGGCPYNDPRLKGLA 43
>SB_30369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 244 VRIRPMC*NDCRSPGSLRK*ILHTSSSPGCTN 149
+ RP N C PG ++ ++HT+S+ C+N
Sbjct: 672 IYFRPHWVNGCVQPGYVQTNVVHTTSTFPCSN 703
>SB_21441| Best HMM Match : zf-A20 (HMM E-Value=2.2)
Length = 308
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 112 GDVGPCGAYFKLYSYNQETKKCEEFIYGG-CQGNDNRFNTLAECEQKCISNRYLR 273
G GP GA Y+ +E+ K E+ G C+G N N EC + C RY R
Sbjct: 216 GSQGP-GAGCVRYTIGRESSKEEKTDSSGQCKGCPNTTNPYHECSEYC-HKRYGR 268
>SB_11120| Best HMM Match : DUF1080 (HMM E-Value=0.082)
Length = 748
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 244 VRIRPMC*NDCRSPGSLRK*ILHTSSSPGCTN 149
+ RP N C PG ++ ++HT+S+ C+N
Sbjct: 653 IYFRPHWVNGCVQPGYVQTNVVHTTSTFPCSN 684
>SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07)
Length = 552
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 134 PTLNYIRTTRRRRSVKNSFTEAARGTTIVSTHWPNANRN 250
PT+ TT +V + T A+ T+ +TH N N N
Sbjct: 392 PTITTTPTTTTTTTVSTATTTKAKEMTMEATHSDNINNN 430
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,430,414
Number of Sequences: 59808
Number of extensions: 237622
Number of successful extensions: 539
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 560496285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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