Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40269
         (672 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0045 - 7705728-7707581                                           29   2.6  
12_02_1131 - 26358339-26360609                                         29   4.5  

>11_02_0045 - 7705728-7707581
          Length = 617

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 64  FYVSRSRNINLRYLLSYTSLIGEVSCSFNVF 156
           F V++S N N+RY + Y+     VSCS + F
Sbjct: 488 FEVTQSENANIRYTVLYSEPRASVSCSCHKF 518


>12_02_1131 - 26358339-26360609
          Length = 756

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +1

Query: 46  CFC*KSFYVSRSRNINLRYLLSYTSLIGEVSCSFNVFTARCPKYK-FSTRIVELLPLI-S 219
           C C    Y+S  R++++  L  Y++   E+ C  +  +A  P+   F     E+ PL+ +
Sbjct: 269 CLCVYPAYLSSERSLDIWLLTDYSTATWELRCRIDPTSATSPETNDFFLVNREVTPLVLT 328

Query: 220 VTHSTFLILRE 252
             H   L+L E
Sbjct: 329 DDHRRVLLLSE 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,142,885
Number of Sequences: 37544
Number of extensions: 264357
Number of successful extensions: 406
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)