Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40266
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p pro...   128   7e-30
AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p pro...   128   7e-30
AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA...   128   7e-30
AY113578-1|AAM29583.1|  373|Drosophila melanogaster RH30783p pro...    29   3.4  
AE014134-2987|AAF53717.1|  373|Drosophila melanogaster CG17321-P...    29   3.4  
U82539-1|AAB71337.1|  214|Drosophila melanogaster arrowhead prot...    29   4.5  
BT025230-1|ABF17921.1|  275|Drosophila melanogaster FI01007p pro...    29   5.9  
AY071197-1|AAL48819.1|  275|Drosophila melanogaster RE24382p pro...    29   5.9  
AE014298-658|AAF45971.2|  714|Drosophila melanogaster CG15473-PA...    29   5.9  
AE014296-705|AAF47800.2|  214|Drosophila melanogaster CG1072-PA,...    29   5.9  
AE014296-704|AAN11572.1|  275|Drosophila melanogaster CG1072-PB,...    29   5.9  
BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p pro...    28   7.8  
BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p pro...    28   7.8  
AE014134-3005|AAF53730.2|  716|Drosophila melanogaster CG10431-P...    28   7.8  
AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-P...    28   7.8  
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    28   7.8  

>BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p
           protein.
          Length = 188

 Score =  128 bits (308), Expect = 7e-30
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 258 RLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 437
           RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R AR A +
Sbjct: 91  RLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACK 150

Query: 438 HFGPAPGAPRSHTKPYVRTKGHE 506
           HFG APG P SHT+PYVR+KG +
Sbjct: 151 HFGKAPGVPHSHTRPYVRSKGRK 173



 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = +1

Query: 1   INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVS 180
           INHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+S+ 
Sbjct: 5   INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQ 64

Query: 181 RLARHM*KPTREGLIAVVVGTVTNE 255
           R+AR      +     VVVGTVT++
Sbjct: 65  RIARFFKAANQPESTIVVVGTVTDD 89


>AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p
           protein.
          Length = 188

 Score =  128 bits (308), Expect = 7e-30
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 258 RLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 437
           RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R AR A +
Sbjct: 91  RLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACK 150

Query: 438 HFGPAPGAPRSHTKPYVRTKGHE 506
           HFG APG P SHT+PYVR+KG +
Sbjct: 151 HFGKAPGVPHSHTRPYVRSKGRK 173



 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = +1

Query: 1   INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVS 180
           INHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+S+ 
Sbjct: 5   INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQ 64

Query: 181 RLARHM*KPTREGLIAVVVGTVTNE 255
           R+AR      +     VVVGTVT++
Sbjct: 65  RIARFFKAANQPESTIVVVGTVTDD 89


>AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA
           protein.
          Length = 188

 Score =  128 bits (308), Expect = 7e-30
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 258 RLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 437
           RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R AR A +
Sbjct: 91  RLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACK 150

Query: 438 HFGPAPGAPRSHTKPYVRTKGHE 506
           HFG APG P SHT+PYVR+KG +
Sbjct: 151 HFGKAPGVPHSHTRPYVRSKGRK 173



 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 44/85 (51%), Positives = 56/85 (65%)
 Frame = +1

Query: 1   INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVS 180
           INHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+S+ 
Sbjct: 5   INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQ 64

Query: 181 RLARHM*KPTREGLIAVVVGTVTNE 255
           R+AR      +     VVVGTVT++
Sbjct: 65  RIARFFKAANQPESTIVVVGTVTDD 89


>AY113578-1|AAM29583.1|  373|Drosophila melanogaster RH30783p
           protein.
          Length = 373

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 336 QQPKCVHELFR*HEEQPPSSSVSCTVSLICDCPHYHGNQTLTSWLLHVARQTRH 175
           Q P    ELF    E  P S ++C+  L     H++GN T TS L +  +Q+ +
Sbjct: 250 QVPDDASELFIEDREMTPMSPINCSTDLQATPYHHNGNAT-TSDLYNQQQQSSY 302


>AE014134-2987|AAF53717.1|  373|Drosophila melanogaster CG17321-PA
           protein.
          Length = 373

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 336 QQPKCVHELFR*HEEQPPSSSVSCTVSLICDCPHYHGNQTLTSWLLHVARQTRH 175
           Q P    ELF    E  P S ++C+  L     H++GN T TS L +  +Q+ +
Sbjct: 250 QVPDDASELFIEDREMTPMSPINCSTDLQATPYHHNGNAT-TSDLYNQQQQSSY 302


>U82539-1|AAB71337.1|  214|Drosophila melanogaster arrowhead
           protein.
          Length = 214

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = -2

Query: 461 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 318
           CSW    +  C+    L   Q C +  R    +   SKNF +    +C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKSC 73


>BT025230-1|ABF17921.1|  275|Drosophila melanogaster FI01007p
           protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 461 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 318
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>AY071197-1|AAL48819.1|  275|Drosophila melanogaster RE24382p
           protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 461 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 318
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>AE014298-658|AAF45971.2|  714|Drosophila melanogaster CG15473-PA
           protein.
          Length = 714

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 296 KSSHRHLRYLVQSHSFVTVPTTTAIKPSRV 207
           KSSHRH  ++  + S  T  +TTA  PS +
Sbjct: 624 KSSHRHEAFVSTTSSTSTTTSTTATPPSTI 653


>AE014296-705|AAF47800.2|  214|Drosophila melanogaster CG1072-PA,
           isoform A protein.
          Length = 214

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 461 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 318
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>AE014296-704|AAN11572.1|  275|Drosophila melanogaster CG1072-PB,
           isoform B protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 461 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 318
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p
           protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
 Frame = -2

Query: 380 RSTKSQLIKS-KNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHSFVTVPTTTAIK---PS 213
           R  K+  +K   NFS    + C  FF +     +H+RY+ QS S        + K     
Sbjct: 575 RRQKAHFVKLIPNFSGRC-SGCLKFFRSRLGLRQHMRYICQSLSLKNHRRLQSFKCRHCQ 633

Query: 212 RVGFYMWRAKRDTEIGGR 159
            + F  WR  R  E+  R
Sbjct: 634 AIAFAHWRLYRRHELNCR 651


>BT022180-1|AAY51574.1|  413|Drosophila melanogaster IP01243p
           protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = -1

Query: 522 RLGLAFHVPW-CEH---RV*CESAVLLEQGQSDALPHEHFADLVPVLSSCQSEHEEPADQ 355
           RLG+AFH    CE+   R+  +   +LE  + DA  +  F +  P+L    S+ EEP D 
Sbjct: 60  RLGVAFHFKQECENSDLRL-RQYLGILESWRQDAATNTDFVEK-PLLPQRDSDEEEPVDA 117

Query: 354 K 352
           K
Sbjct: 118 K 118


>AE014134-3005|AAF53730.2|  716|Drosophila melanogaster CG10431-PA
           protein.
          Length = 716

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
 Frame = -2

Query: 380 RSTKSQLIKS-KNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHSFVTVPTTTAIK---PS 213
           R  K+  +K   NFS    + C  FF +     +H+RY+ QS S        + K     
Sbjct: 529 RRQKAHFVKLIPNFSGRC-SGCLKFFRSRLGLRQHMRYICQSLSLKNHRRLQSFKCRHCQ 587

Query: 212 RVGFYMWRAKRDTEIGGR 159
            + F  WR  R  E+  R
Sbjct: 588 AIAFAHWRLYRRHELNCR 605


>AE014134-2691|AAF53516.2|  413|Drosophila melanogaster CG17328-PA
           protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = -1

Query: 522 RLGLAFHVPW-CEH---RV*CESAVLLEQGQSDALPHEHFADLVPVLSSCQSEHEEPADQ 355
           RLG+AFH    CE+   R+  +   +LE  + DA  +  F +  P+L    S+ EEP D 
Sbjct: 60  RLGVAFHFKQECENSDLRL-RQYLGILESWRQDAATNTDFVEK-PLLPQRDSDEEEPVDA 117

Query: 354 K 352
           K
Sbjct: 118 K 118


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 459  LLEQGQSDALPHEHFADLVPVLSSCQSEHEEPAD 358
            L+EQ  S+ L HE   ++VPV +  + + E P +
Sbjct: 2622 LIEQSNSEILYHESIVEVVPVSTQEEVQVENPCE 2655


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,791,574
Number of Sequences: 53049
Number of extensions: 628048
Number of successful extensions: 1808
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1807
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)