Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40263
(625 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58299| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.42) 100 2e-21
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 34 0.11
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 33 0.25
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 32 0.33
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 31 0.57
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 31 0.76
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 31 1.0
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 30 1.3
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 29 2.3
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 2.3
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 29 4.1
SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08) 28 5.4
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 28 5.4
SB_37037| Best HMM Match : PSI (HMM E-Value=0.061) 28 5.4
SB_9039| Best HMM Match : M (HMM E-Value=0.00046) 28 5.4
SB_31659| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 28 7.1
SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3) 28 7.1
SB_17120| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 28 7.1
SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32) 27 9.4
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 27 9.4
SB_25983| Best HMM Match : IncA (HMM E-Value=0.17) 27 9.4
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 27 9.4
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 27 9.4
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 27 9.4
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 27 9.4
>SB_58299| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.42)
Length = 329
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/78 (57%), Positives = 60/78 (76%)
Frame = -3
Query: 506 ITAAKEALKKEMEVVQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRYTRANLASKKDR 327
+++AK L++EM+ V++ M H DL ++AY++VWEEC AQVLFLP Q RYTRA +ASKKDR
Sbjct: 182 LSSAKNLLRQEMDFVKSKMAHSDLPLEAYSKVWEECYAQVLFLPSQQRYTRAAMASKKDR 241
Query: 326 LESAEKRLEQNRNHMAKE 273
LES EKRLE + K+
Sbjct: 242 LESLEKRLETRAVGLTKQ 259
Score = 77.4 bits (182), Expect = 9e-15
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = -2
Query: 264 MFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIES 85
M + +L L ++RA KQ +L +Q+EQ+ +E++TF+ L QE AIP+R+E+
Sbjct: 235 MASKKDRLESLEKRLETRAVGLTKQLSDLHEQLEQSQVEMTTFQALRNQELQAIPKRLEA 294
Query: 84 LTEDISXQTEREKLLQKRYSELQTE 10
L ED+ QTEREK LQ +YSEL E
Sbjct: 295 LKEDVQRQTEREKQLQAQYSELLYE 319
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 36.3 bits (80), Expect = 0.020
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = -2
Query: 312 EKIRAE*KSHGEGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQ-----ANLE 148
++ R E ++ E EKKLRV + Y + I+ +EL ++I++ A+LE
Sbjct: 631 DRKRRELQAQVEEMSSEANREKKLRVRSDQYSKQLEEEIEYLKELSEKIQEIETKKASLE 690
Query: 147 LSTFKFLAEQEKAAIPRRIESLTEDISXQTERE-KLLQKRYSELQTEVE 4
++ R + +T +++ + ERE KLL++ +LQ+E++
Sbjct: 691 NECWRKAKIVLSLFSQREQQEMTLEMNRKNERERKLLREENKKLQSEID 739
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Frame = -2
Query: 273 SKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIP-- 100
S++ ++E +L VL Y+SR A K+ E + + E + + L ++EKA +
Sbjct: 1529 SQRSSELEMRLSVLQSQYESRLAKIEKELTEAKAEKEMTEKSKAELEELQQKEKAGLGSN 1588
Query: 99 -----RRIESLTEDISXQTEREKLLQKRYSELQT 13
R +E L + + Q ++ + Q R + L T
Sbjct: 1589 QFVAYREMEQLQQKLQQQQKQIQQQQMRLTSLTT 1622
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/92 (20%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = -2
Query: 270 KKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAE---QEKAAIP 100
K+ +++ L + A K +ELQ + + +L++S ++ ++K A+
Sbjct: 504 KEKEELQDDLLTAQAKFNELQAELDKAHRELQKESKGGSLKISKYEAQINNVTKQKNALK 563
Query: 99 RRIESLTEDISXQTEREKLLQKRYSELQTEVE 4
+++++L ED+ E + LLQ+ E + +++
Sbjct: 564 QQVDNLREDLKKSKEAQNLLQREVLENRKDLD 595
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/69 (21%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -2
Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQE---KAAIPRRIESLTEDISXQTEREKLLQKRY 28
+++++ L+D++EQ +LST + ++E + A+ + + ED+ + +++KR
Sbjct: 1150 MREYELLKDEVEQLRSKLSTTELQLDEEIRKRKALQKERDDKAEDLYEKENEVVVMKKRV 1209
Query: 27 SELQTEVEN 1
E + + N
Sbjct: 1210 KEFELLISN 1218
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = -2
Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSEL 19
IK++Q+ D+ ++ + + A +EK + R+ SL + I + K L+ + + L
Sbjct: 990 IKKYQKAADEAKRDLVAANVAADAAREEKRDMERKFNSLKDRIDALEKEIKELKAQRNNL 1049
Query: 18 QTEVEN 1
+TE+ N
Sbjct: 1050 ETELSN 1055
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 31.1 bits (67), Expect = 0.76
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -2
Query: 246 KLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKF---LAEQEKAAIPRRIESLTE 76
+L L+ YQ AA Q QEL E A E+S K +AE+ + + R +
Sbjct: 1040 RLEDLSKQYQQEAAALKTQIQELTKVKENALREISELKLQLKMAEEARDGVRRELIDAHR 1099
Query: 75 DISXQTEREKLLQKRYSELQTEVEN 1
I E ++ +K ++L+ ++++
Sbjct: 1100 KIREGEEAREVARKENTDLKRQLKD 1124
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/91 (19%), Positives = 42/91 (46%)
Frame = -2
Query: 273 SKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRR 94
S+ + KMEKKL Q K+ + D++E ++ + + ++++ ++ +
Sbjct: 376 SENLSKMEKKLSETQEKLQDMEEKFSKEKRAWADEVESLETDVKSLQLISDESESKLREA 435
Query: 93 IESLTEDISXQTEREKLLQKRYSELQTEVEN 1
SL E E + L++ + +T ++N
Sbjct: 436 QSSLRE----YREENRKLKRELEKFETSMDN 462
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/97 (20%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = -2
Query: 273 SKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRR 94
+ ++ K E+++ ++ ++ A K Q L++ IE A E + E+E+ +
Sbjct: 406 TSQVAKAEEEVSIIKRQHEQAAMEYSKNMQALKELIELAEKEKAELHCQVEEERRLLSFY 465
Query: 93 IESLTEDISXQTEREKLL--------QKRYSELQTEV 7
TED+ + E+++ +K+ ELQ+++
Sbjct: 466 ARRKTEDLQFKLAEEEIILGDELKSEEKQIQELQSKI 502
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 144 STFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
S+ FL+ QE I R +E+L ++ Q +LQK EL +EN
Sbjct: 32 SSHSFLSSQED--IHREVETLRQERERQENESYVLQKSLDELSIRLEN 77
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = -2
Query: 195 KQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQ 16
KQ E +++++ EL T ++E+ A+ E+LTE ++ ERE+LL ++ + +
Sbjct: 485 KQGNEHDERVDEIRKELKT-----KEERIAVLE--EALTESVTIAAEREELLAQQANSAE 537
Query: 15 TEVE 4
+ +
Sbjct: 538 SATQ 541
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -2
Query: 234 LTGGYQSRAAXXIKQFQEL---QDQIEQANLELST-FKFLAEQEKAAIPRRIESLTEDIS 67
LTGG +S +A + + QEL QD++ + EL T K LA K A + + L +
Sbjct: 484 LTGGARSSSASILAKLQELKEAQDELNSKSKELETVVKELATCSKVA--EKYQQLKQQYD 541
Query: 66 XQTEREKLLQKRYSE 22
+ KL + R +
Sbjct: 542 LKGHEAKLAETRMKQ 556
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -2
Query: 186 QELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQ 16
Q LQ+Q++Q ELS+ K + K + + E ++ + ++ Y ELQ
Sbjct: 4550 QNLQEQLKQKEFELSSLKEEVDTTKQFAEQAANQMNEQQQEYEDQLRKMEMLYGELQ 4606
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 414 LSVRVYTKVPMSHSRLHDFHFFLQCFFSGSNSRQQTLHMDAVLSMLN 554
LS + VP+ H +F F + F+SG R Q L V M+N
Sbjct: 272 LSYTIKKSVPVWHGSYGNFTFIMDLFYSGRYQRAQGLADYPVPVMIN 318
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = -2
Query: 186 QELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEV 7
Q+L+D + + + S+FK EK ++ RR+E+ +ED +R + L K +++ ++
Sbjct: 1057 QKLKDYVRSEHFK-SSFKE-TRAEKKSMERRLENSSEDFKAMLQRMQKLDKENVQIRDKM 1114
>SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08)
Length = 889
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = -2
Query: 174 DQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEV 7
DQ++ ELS K ++ I + +S+ +I REKLL+++ + QTE+
Sbjct: 189 DQVDSVMTELSKVKAQRDELLLQIEKSEDSIKMEID---SREKLLEQQLQKTQTEL 241
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 356 RANLASKKDRLESAEKRLEQNRNHMAKEAKKCSK 255
R L KK+RL KRL + + + KE ++ K
Sbjct: 558 RKRLNKKKERLNKVRKRLNKEKERLNKEMERLDK 591
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 180 LQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
L D A+ + S K + QEK +P + + TE + E + + +QTE +N
Sbjct: 677 LPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTESTETRAEVKTFDHSKLKHVQTEEKN 736
>SB_37037| Best HMM Match : PSI (HMM E-Value=0.061)
Length = 284
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 335 KDRLESAEKRLEQNRNHMAKEAKKCSKWKRNF 240
+D+L +EKR E+ + H ++ +K K+K +
Sbjct: 244 EDKLTPSEKRRERKKKHKEEQREKMEKFKEKY 275
>SB_9039| Best HMM Match : M (HMM E-Value=0.00046)
Length = 716
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = -2
Query: 273 SKKMFKMEKKL----RVLTGGYQSRAAXXIKQFQE----LQDQIEQANLELSTFKFLAEQ 118
+K+ FK+E+KL R L ++ A + + LQD I LS + EQ
Sbjct: 454 TKEKFKLEEKLERERRRLQEEHEEVMAELAQDCADKRKMLQDDIASVESRLSNERQQVEQ 513
Query: 117 EKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
++ + + E+L + +EK ++K+ +L E N
Sbjct: 514 QRQQLEKEQEALKRVQAELENQEKDVEKKRKKLDEEKSN 552
>SB_31659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = -2
Query: 258 KMEKKLRV--LTGGYQ-SRAAXXIKQFQELQDQI-EQANLELSTFKFLAEQEKA 109
K+EKK V L GG + + A ++++L+ I E+A+L +STF E+EKA
Sbjct: 248 KLEKKRPVIWLNGGIEVPKLASLALKYKKLKVLIFEKADLAVSTFTISPEREKA 301
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = -2
Query: 273 SKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQA------NLELSTFKFLAEQEK 112
+ +M K K + +SR A + +LQDQ +QA + + T K + ++
Sbjct: 322 ASRMTKTSKPQDQVKQAARSRQASRKTKTSKLQDQDKQAAKPRQASRKTKTSKLQNQNKQ 381
Query: 111 AAIPRRIESLTEDISXQTEREKLLQKRYSELQ 16
AAIPR+ T+ Q + ++ K+ E Q
Sbjct: 382 AAIPRQASRKTKTSKPQDQDKQEQDKQDQEKQ 413
>SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3)
Length = 112
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 362 YTRANLASKKDRLESAEKRLEQNRNHMAKEAKK 264
Y R AS K LE+ EKR+EQ ++ +E ++
Sbjct: 55 YARLQNASLKVALETTEKRMEQKKSIAIREIER 87
>SB_17120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 72 CLRSTIL-FYVEWPLSPVQPRI*RS 143
CLR T+L F V +PLS PR+ +S
Sbjct: 108 CLRDTLLAFSVRYPLSTAMPRVSKS 132
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = -2
Query: 258 KMEKKLRVLTGGYQSRAAXXIKQFQ-ELQDQIEQANLELSTFKFLAEQ---EKAAIPRRI 91
K+E ++ L Y + + +LQ ++ EL ++L Q EKA+I R++
Sbjct: 1024 KLESEMGTLKKEYTNLKVSSERNIAIQLQKHVDGHRKELMEKEYLIAQLRSEKASIERQV 1083
Query: 90 ESLTEDISXQTEREKLLQKRYSELQTE 10
ESL I+ + + E QTE
Sbjct: 1084 ESLKNQITVIQSENEANVSIHVESQTE 1110
>SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32)
Length = 584
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 186 QELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSE 22
+ L D+IE L+L +A + + R++ E + Q ER +LQK +E
Sbjct: 12 KSLTDEIEAVQLQLQ----MACERRDQYNRQLNEALESLKEQRERNTVLQKELTE 62
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 120 QEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEV 7
++ AA+ +IESL E+ + KLLQK + + V
Sbjct: 402 EQVAAMSNKIESLVEECEKHKRQTKLLQKEIDDQREAV 439
>SB_25983| Best HMM Match : IncA (HMM E-Value=0.17)
Length = 385
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = -2
Query: 255 MEKKLRVLTG---GYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIES 85
+++K+R L G + ++A + Q +L + E+ S K + E +K+ + ++++S
Sbjct: 83 LQQKIRSLAGKKISIEKKSATLLSQITDLSSEKEKFE---SAAKEV-EGKKSVLEKKVKS 138
Query: 84 LTEDISXQTEREKLLQKRYSELQTEV 7
+ ++ Q + LQK + +TEV
Sbjct: 139 MEIEVRQQNAKLTGLQKEGGKYKTEV 164
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -2
Query: 195 KQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQ 16
K +E + + E+ N+ + +F ++Q+ R+E LTE+ R ++ K + L+
Sbjct: 194 KHSEEYRQKRERNNVAVRKSRFKSKQKFIETQSRVEELTEENERLHSRIDIITKELNALR 253
Query: 15 TEVEN 1
+ N
Sbjct: 254 SLFSN 258
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 353 ANLASK-KDRLESAEKRLEQNRNHMAKEAKKCSKWKR 246
ANL + + R E AEK+ E+ +E + KWK+
Sbjct: 249 ANLMEEERKRKEEAEKKREEEERKRREEEEAAQKWKK 285
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = -2
Query: 195 KQFQELQDQIEQANLELSTFKFLA---EQEKAAIPRRIESLTEDISXQTEREKLLQKRYS 25
++ QEL++++E+A + + E+E + + SL +ERE + +
Sbjct: 125 ERLQELENELEEAEQKADAAEARVKELEEEVTLVGNNLRSLEISEGKASEREDTYENQIR 184
Query: 24 ELQTEVEN 1
EL+T++++
Sbjct: 185 ELETKLQD 192
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 258 KMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELS 142
K+ ++ RV Y+ KQ++E ++QI + +LELS
Sbjct: 410 KLLQEERVRAEKYEDALTALNKQYEETENQIREKDLELS 448
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,921,802
Number of Sequences: 59808
Number of extensions: 301875
Number of successful extensions: 988
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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