Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40263
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       23   6.0  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       23   6.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   7.9  

>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESL 82
           IK  + L+D+I      L   KFL  Q+ A   + ++++
Sbjct: 101 IKLLERLKDEIATKRPHLKKKKFLFHQDNAPCHKSVKTM 139


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESL 82
           IK  + L+D+I      L   KFL  Q+ A   + ++++
Sbjct: 101 IKLLERLKDEIATKRPHLKKKKFLFHQDNAPCHKSVKTM 139


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 400 HSSQ--T*VYASTLRSP*VIPACTTSISFFSASLAA 501
           HSSQ  T     T+ +   +PACTT+ S  S S A+
Sbjct: 20  HSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGAS 55


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 400 HSSQ--T*VYASTLRSP*VIPACTTSISFFSASLAA 501
           HSSQ  T     T+ +   +PACTT+ S  S S A+
Sbjct: 20  HSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGAS 55


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 180 LQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQ-TEREKLLQKRYSELQTE 10
           L ++ E+   EL   K   ++ K+A+      L      + TER KL   RYS  +TE
Sbjct: 462 LLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKLESLRYSYEETE 519


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,693
Number of Sequences: 2352
Number of extensions: 9329
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)