Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40263
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical p... 77 8e-15
Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical p... 77 8e-15
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 36 0.031
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 36 0.031
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 36 0.031
U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical pr... 31 0.51
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 31 0.88
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 31 0.88
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 30 1.2
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 30 1.2
Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 29 3.6
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 3.6
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 3.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 3.6
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 29 3.6
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 3.6
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 28 6.2
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 28 6.2
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 28 6.2
>Z75711-11|CAB00038.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 77.4 bits (182), Expect = 8e-15
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = -2
Query: 273 SKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRR 94
+K+ K+EKKLRV GGYQ+ K++QE+ +IE AN+E TF+ L E E AI +R
Sbjct: 646 AKRAAKVEKKLRVKLGGYQAIHDKLCKKYQEVTTEIEMANIEKKTFERLGEHELKAINKR 705
Query: 93 IESLTEDISXQTEREKLLQKRYSELQTE 10
+ L ++++ Q REK LQK YS+L +
Sbjct: 706 VGRLQQEVTTQETREKDLQKMYSKLSNK 733
>Z75710-10|CAB00029.1| 755|Caenorhabditis elegans Hypothetical
protein D1081.8 protein.
Length = 755
Score = 77.4 bits (182), Expect = 8e-15
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = -2
Query: 273 SKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRR 94
+K+ K+EKKLRV GGYQ+ K++QE+ +IE AN+E TF+ L E E AI +R
Sbjct: 646 AKRAAKVEKKLRVKLGGYQAIHDKLCKKYQEVTTEIEMANIEKKTFERLGEHELKAINKR 705
Query: 93 IESLTEDISXQTEREKLLQKRYSELQTE 10
+ L ++++ Q REK LQK YS+L +
Sbjct: 706 VGRLQQEVTTQETREKDLQKMYSKLSNK 733
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/93 (22%), Positives = 41/93 (44%)
Frame = -3
Query: 527 MKSLLTRITAAKEALKKEMEVVQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRYTRAN 348
++S + ALK +++ + H +V+ +T + +QV L + T+ N
Sbjct: 1242 VRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGN 1301
Query: 347 LASKKDRLESAEKRLEQNRNHMAKEAKKCSKWK 249
L K+ LES + RL + + +KW+
Sbjct: 1302 LVQKEMDLESTQNRLRSLEDQHSTLQSDANKWR 1334
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/93 (22%), Positives = 41/93 (44%)
Frame = -3
Query: 527 MKSLLTRITAAKEALKKEMEVVQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRYTRAN 348
++S + ALK +++ + H +V+ +T + +QV L + T+ N
Sbjct: 1315 VRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGN 1374
Query: 347 LASKKDRLESAEKRLEQNRNHMAKEAKKCSKWK 249
L K+ LES + RL + + +KW+
Sbjct: 1375 LVQKEMDLESTQNRLRSLEDQHSTLQSDANKWR 1407
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 35.5 bits (78), Expect = 0.031
Identities = 21/93 (22%), Positives = 41/93 (44%)
Frame = -3
Query: 527 MKSLLTRITAAKEALKKEMEVVQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRYTRAN 348
++S + ALK +++ + H +V+ +T + +QV L + T+ N
Sbjct: 1315 VRSEAKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLEDELADTKGN 1374
Query: 347 LASKKDRLESAEKRLEQNRNHMAKEAKKCSKWK 249
L K+ LES + RL + + +KW+
Sbjct: 1375 LVQKEMDLESTQNRLRSLEDQHSTLQSDANKWR 1407
>U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical
protein C56E10.3 protein.
Length = 531
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 126 AEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVE 4
A Q+ AA+ + E L D++ +TE EK ++RY E+ +E
Sbjct: 111 AVQQWAAVDVKEEKLYVDLTHETELEKQFKERYDEITRNLE 151
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = -2
Query: 255 MEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFL---AEQEKAAIPRRIES 85
+E+ + G + + A +Q +EL DQIEQ + S + A+QE+A + + I
Sbjct: 1182 IEQIQHTMEGKIEEQKAKFSRQVEELHDQIEQHKKQRSQLEKQQNQADQERADMAQEIAL 1241
Query: 84 LTEDISXQTEREKLLQKRYSELQTEV 7
L + ++ K+ + E+Q +
Sbjct: 1242 LQASRADIDKKRKIHEAHLMEIQANL 1267
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = -2
Query: 270 KKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLA---EQEKAAIP 100
+K +EK++ L+G + ++F+EL+D++E E + L E E A +
Sbjct: 202 QKCGDLEKQVEKLSG-VKEEFEEMSEKFKELEDEVELVKEERENIRLLVEDKEDEVADLK 260
Query: 99 RRIESLTEDISXQTEREKLLQKRYSELQTEVE 4
+ ESL + + E +++ E Q +V+
Sbjct: 261 QDTESLQKQLEENQEELEIVGNMLREEQGKVD 292
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Frame = -2
Query: 312 EKIRAE*KSHGEGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFK 133
+K+ AE +++ E K K+E +L+ Q++ +K+ E ++ E+ K
Sbjct: 181 DKLAAEKRANNEHVKHNKKLEGQLKAT----QTQLTLALKEKHEFDVDCKRRESEIGELK 236
Query: 132 FLAEQEKAAIPR----------RIESLTEDISXQTEREKLLQKRYSELQTEVE 4
A+ + I + RIE L ED+ + + +++++EL++E E
Sbjct: 237 LKAQGDANLISKLQAMLRKCISRIEELEEDLLEERKLRMKAERQFNELRSEYE 289
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Frame = -2
Query: 312 EKIRAE*KSHGEGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFK 133
+K+ AE +++ E K K+E +L+ Q++ +K+ E ++ E+ K
Sbjct: 1026 DKLAAEKRANNEHVKHNKKLEGQLKAT----QTQLTLALKEKHEFDVDCKRRESEIGELK 1081
Query: 132 FLAEQEKAAIPR----------RIESLTEDISXQTEREKLLQKRYSELQTEVE 4
A+ + I + RIE L ED+ + + +++++EL++E E
Sbjct: 1082 LKAQGDANLISKLQAMLRKCISRIEELEEDLLEERKLRMKAERQFNELRSEYE 1134
>Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical
protein F15G9.5 protein.
Length = 272
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 8 TSVCSSEYRFCKSFSRSVCXLMSSVNDSILRGMAAFSCSAK 130
T +CS+E C + +VC + V+ LRGM C A+
Sbjct: 33 THMCSAEGNICSENAATVCRNNTCVSACSLRGMQECECDAE 73
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -3
Query: 404 ECLAQVLFLPGQHRYTRANLASKKDRLESAEKRLEQNRNHMAKEAKKCSKWKRNFVC 234
E Q + G H+ R L+SK+ R EKRL N + + KKC ++ C
Sbjct: 697 ESNVQCMACMGPHKSMRCTLSSKQFREVIREKRLCANCLNPHHDIKKCRSYRSCAYC 753
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = -2
Query: 219 QSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLL 40
Q +K+ E D +E+AN + ++ +A I + ESL + +S E+++ L
Sbjct: 75 QQMITQHLKKRNEYLDDLEEANERIKILDEKLDKLEAKISKTEESLVQSVSMLLEKDEQL 134
Query: 39 QKRYSELQ 16
+ E++
Sbjct: 135 KTIRKEMK 142
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = -2
Query: 309 KIRAE*KSHGEGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKF 130
K++A+ + + + + EK+ R + + +K QE D+ + +L
Sbjct: 1031 KVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESGRQRHDLENNLK 1090
Query: 129 LAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
E E ++ R+E +S + K Q R SEL+ E+EN
Sbjct: 1091 KKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELEN 1133
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = -2
Query: 309 KIRAE*KSHGEGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKF 130
K++A+ + + + + EK+ R + + +K QE D+ + +L
Sbjct: 1031 KVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESGRQRHDLENNLK 1090
Query: 129 LAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
E E ++ R+E +S + K Q R SEL+ E+EN
Sbjct: 1091 KKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELEN 1133
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -2
Query: 183 ELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVE 4
E D I A EL + E+E I +++ L E + + +K Y ELQ EV+
Sbjct: 753 EQVDNINDALGELQEKLSILEEEAYCIQDKLDELDEKFQPAIKTKNESEKNYVELQQEVK 812
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 153 LELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
LE +L E+ A ++ E + Q EREK L+K+ + E+E+
Sbjct: 75 LEALDLAYLERDEQTAELEMLKEDNEQLQTQYEREKALRKQTEQKYIEIED 125
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 153 LELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
LE +L E+ A ++ E + Q EREK L+K+ + E+E+
Sbjct: 75 LEALDLAYLERDEQTAELEMLKEDNEQLQTQYEREKALRKQTEQKYIEIED 125
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 153 LELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
LE +L E+ A ++ E + Q EREK L+K+ + E+E+
Sbjct: 39 LEALDLAYLERDEQTAELEMLKEDNEQLQTQYEREKALRKQTEQKYIEIED 89
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSEL 19
++QF++ +IE ANL L T + AA+ + E E+LLQK+ EL
Sbjct: 1031 VRQFEDRITEIESANLRLQT---ELNNKCAALVAESTAKREADQMIEHAERLLQKKTEEL 1087
Query: 18 QT-EVEN 1
+ E EN
Sbjct: 1088 NSIEEEN 1094
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSEL 19
++QF++ +IE ANL L T + AA+ + E E+LLQK+ EL
Sbjct: 1031 VRQFEDRITEIESANLRLQT---ELNNKCAALVAESTAKREADQMIEHAERLLQKKTEEL 1087
Query: 18 QT-EVEN 1
+ E EN
Sbjct: 1088 NSIEEEN 1094
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSEL 19
++QF++ +IE ANL L T + AA+ + E E+LLQK+ EL
Sbjct: 1031 VRQFEDRITEIESANLRLQT---ELNNKCAALVAESTAKREADQMIEHAERLLQKKTEEL 1087
Query: 18 QT-EVEN 1
+ E EN
Sbjct: 1088 NSIEEEN 1094
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = -2
Query: 309 KIRAE*KSHGEGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKF 130
K++A+ + + + + EK+ R + + +K QE D+ + +L
Sbjct: 1034 KVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESGRQRHDLENNLK 1093
Query: 129 LAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
E E ++ R+E +S + K Q R SEL+ E+EN
Sbjct: 1094 KKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELEN 1136
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = -2
Query: 219 QSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLL 40
Q +K+ E D +E+AN + ++ +A I + ESL + +S E+++ L
Sbjct: 75 QQMITQHLKKRNEYLDDLEEANERIKILDEELDKLEAKISKTEESLVQSVSMLLEKDEQL 134
Query: 39 QKRYSELQ 16
+ E++
Sbjct: 135 KTIRKEMK 142
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 153 LELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
LE +L E+ A ++ E + Q EREK L+K+ + E+E+
Sbjct: 75 LEALDLAYLERDEQTAELEMLKEDNEQLQTQYEREKALRKQTEQKYIEIED 125
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 268 KNVQNGKETSCANRRLPESCRXXHKTVSRITRS 170
+N +NGK+ S RRL S SR TRS
Sbjct: 908 ENAENGKKASATKRRLVSSSSDESDQESRSTRS 940
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 268 KNVQNGKETSCANRRLPESCRXXHKTVSRITRS 170
+N +NGK+ S RRL S SR TRS
Sbjct: 908 ENAENGKKASATKRRLVSSSSDESDQESRSTRS 940
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 165 EQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVEN 1
EQA + + + E A R+ E+ TED+S R + QK ++ L TE +N
Sbjct: 539 EQAPAAAAAPTSIEQSEPAGTSRQTETETEDLSIPPPRIYITQKPFTRL-TERQN 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,519,300
Number of Sequences: 27780
Number of extensions: 227784
Number of successful extensions: 809
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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