Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40263
(625 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 33 0.20
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 33 0.20
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 33 0.20
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 32 0.36
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 31 0.62
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 30 1.1
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 30 1.4
At5g65070.1 68418.m08185 MADS-box protein (MAF4) contains Pfam p... 29 1.9
At5g48970.1 68418.m06059 mitochondrial substrate carrier family ... 29 1.9
At5g62650.1 68418.m07863 expressed protein 29 2.5
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 29 2.5
At4g11480.1 68417.m01846 protein kinase family protein contains ... 29 2.5
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 29 2.5
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 29 2.5
At5g26350.1 68418.m03150 hypothetical protein 29 3.3
At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transfera... 29 3.3
At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesi... 29 3.3
At3g23890.1 68416.m03002 DNA topoisomerase, ATP-hydrolyzing / DN... 29 3.3
At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containi... 29 3.3
At4g13980.1 68417.m02162 heat shock transcription factor family ... 28 4.4
At3g51220.1 68416.m05607 expressed protein contains Pfam doamin ... 28 4.4
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 28 4.4
At1g50750.1 68414.m05707 expressed protein 28 4.4
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 28 4.4
At3g58840.1 68416.m06558 expressed protein 28 5.8
At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zi... 28 5.8
At1g67230.1 68414.m07652 expressed protein 28 5.8
At5g66310.1 68418.m08360 kinesin motor family protein contains P... 27 7.7
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 27 7.7
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = -2
Query: 279 EGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIP 100
EG+K + +EK R + A ++ +DQI Q + L + + K +I
Sbjct: 818 EGTKDKYNIEKLKRAAISAISAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIF 877
Query: 99 RRIESLTEDISXQTEREKLLQKRYSE 22
ESLT + Q ER + Q+ Y E
Sbjct: 878 NEAESLTMRVREQLERSR--QRLYHE 901
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = -2
Query: 279 EGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIP 100
EG+K + +EK R + A ++ +DQI Q + L + + K +I
Sbjct: 820 EGTKDKYNIEKLKRAAISAISAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIF 879
Query: 99 RRIESLTEDISXQTEREKLLQKRYSE 22
ESLT + Q ER + Q+ Y E
Sbjct: 880 NEAESLTMRVREQLERSR--QRLYHE 903
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = -2
Query: 279 EGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIP 100
EG+K + +EK R + A ++ +DQI Q + L + + K +I
Sbjct: 820 EGTKDKYNIEKLKRAAISAISAAAVKAKNLAKQEEDQIRQLSGSLIEKQLHKLEAKLSIF 879
Query: 99 RRIESLTEDISXQTEREKLLQKRYSE 22
ESLT + Q ER + Q+ Y E
Sbjct: 880 NEAESLTMRVREQLERSR--QRLYHE 903
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 31.9 bits (69), Expect = 0.36
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = -2
Query: 279 EGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQE-KAAI 103
EG+K + +EK R + A ++ +DQI Q + L + L + E K +I
Sbjct: 820 EGTKDKYNIEKLKRAAISAISAAAVKAKNLAKQEEDQIRQLSGSLIEKQQLHKLEAKLSI 879
Query: 102 PRRIESLTEDISXQTEREKLLQKRYSE 22
ESLT + Q ER + Q+ Y E
Sbjct: 880 FNEAESLTMRVREQLERSR--QRLYHE 904
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 31.1 bits (67), Expect = 0.62
Identities = 19/86 (22%), Positives = 43/86 (50%)
Frame = -2
Query: 282 GEGSKKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAI 103
G G+ + K++ K R L +++ +A + E Q+E+ E++ +K + ++AA+
Sbjct: 344 GSGNSALSKLKNKFRNLENIHKNCSANLRSKEAEWSSQVEKMVEEINDYKLQLQSKEAAL 403
Query: 102 PRRIESLTEDISXQTEREKLLQKRYS 25
+ +E E+ T + +L + S
Sbjct: 404 -KEVELELENCRSSTAKMRLQYEEIS 428
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = -2
Query: 300 AE*KSHGEGSK-KMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLA 124
A+ + E SK +M ++E ++ + ++ +K ++LQDQ+ E ST
Sbjct: 229 AQDQERTESSKVQMLELETSVQKVDAEVHNKEMM-LKDLRKLQDQVSIKTAERSTLFKEQ 287
Query: 123 EQEKAAIPRR----IESLTEDISXQTEREKLLQKRYSELQTEV 7
+++ AA+P IE L E S ER LL + +++ E+
Sbjct: 288 QRQYAALPEENEDTIEELKEWKSKFEERLALLGTKIRKMEREM 330
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 267 KMFKMEKKLRVLTGGYQSRAAXXIKQFQE 181
K+ K+ K +R+L+GG S A I+QF +
Sbjct: 1449 KVLKLTKNMRLLSGGLSSEEAKEIQQFSD 1477
>At5g65070.1 68418.m08185 MADS-box protein (MAF4) contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); contains Pfam
profile PF01486: K-box region
Length = 200
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = -2
Query: 186 QELQDQIEQA---NLELSTFKFLAEQEKAAIP----RRIESLTEDISXQTEREKLLQKRY 28
+ +Q +IE+A N+ + K L EQ K A+ R+ E + E + E+EKLL++
Sbjct: 98 ETIQCKIEEAKSDNVSIDCLKSLEEQLKTALSVTRARKTELMMELVKTHQEKEKLLREEN 157
Query: 27 SELQTEV 7
L ++
Sbjct: 158 QSLTNQL 164
>At5g48970.1 68418.m06059 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 339
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 480 LQCFFSGSNSRQQTLHMDAVLSMLNGMLAS*IARLFIYTF 599
L+ F SGS + +H+ LS ++G LA A L Y F
Sbjct: 113 LKSFASGSTKTEDHIHLSPYLSFVSGALAGCAATLGSYPF 152
>At5g62650.1 68418.m07863 expressed protein
Length = 529
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 126 AEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTE 10
A+ KA + + +E LTED+ E KRY L+ E
Sbjct: 459 AQMSKANLKKTMEDLTEDLEQSDEGNDHGSKRYDSLKIE 497
>At5g15920.1 68418.m01862 structural maintenance of chromosomes
(SMC) family protein (MSS2) similar to SMC-related
protein MSS2 [Arabidopsis thaliana] GI:9965743; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1053
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -2
Query: 186 QELQDQI---EQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQ 16
+EL+D I E+ + L T + E+E A + + E + + ++ + L+ RY + +
Sbjct: 628 EELEDSILFMEETHKSLQTEQRRLEEEAAKLHKEREEIVNVSYLEKKKRRELESRYQQRK 687
Query: 15 TEVEN 1
T++E+
Sbjct: 688 TKLES 692
>At4g11480.1 68417.m01846 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 656
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 464 VQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRY 360
+ +G+ GDL+ AYT+ WEE + ++ G+ RY
Sbjct: 141 LNSGLFQGDLA--AYTRTWEEFMNSMITRVGRTRY 173
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/94 (21%), Positives = 44/94 (46%)
Frame = -3
Query: 527 MKSLLTRITAAKEALKKEMEVVQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRYTRAN 348
+K+ L + E+L KE E ++ ++ + +E +++V + + +RA
Sbjct: 175 LKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKANEDEMVSKVSRIGEELEESRAK 234
Query: 347 LASKKDRLESAEKRLEQNRNHMAKEAKKCSKWKR 246
A K++LES E+ + M K + +W++
Sbjct: 235 TAHLKEKLESMEEAKDALEAEMKKLRVQTEQWRK 268
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/94 (21%), Positives = 44/94 (46%)
Frame = -3
Query: 527 MKSLLTRITAAKEALKKEMEVVQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRYTRAN 348
+K+ L + E+L KE E ++ ++ + +E +++V + + +RA
Sbjct: 175 LKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKANEDEMVSKVSRIGEELEESRAK 234
Query: 347 LASKKDRLESAEKRLEQNRNHMAKEAKKCSKWKR 246
A K++LES E+ + M K + +W++
Sbjct: 235 TAHLKEKLESMEEAKDALEAEMKKLRVQTEQWRK 268
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = -2
Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQK 34
+K+ +E ++++E+ +L K E+EK + + L ++ EREK+L++
Sbjct: 50 MKKHKEEKNKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREKVLRQ 104
>At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 180 LQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDI 70
L+D++E+ +E + + L E E AI RIE L E +
Sbjct: 395 LEDRVERNEIEGAIRRLLVEPEGEAIRERIEHLKEKV 431
>At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesin
like protein A, Arabidopsis thaliana, gb:Q07970
Length = 790
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = -2
Query: 270 KKMFKMEKKLRVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRI 91
++M + KKL+V YQ ++ + L ++ A S + A+ ++ + I
Sbjct: 90 EQMTDIIKKLKVCVRWYQQVDETHVQDKENLSSSLQSAEKRYSDKELDAKTKEEELRATI 149
Query: 90 ESLTEDISXQTEREKLLQKRYSELQTEVEN 1
+ E+I ++ +EKL +++ S+L +EN
Sbjct: 150 TEMKENI--ESLQEKLSKEKLSKLDA-IEN 176
>At3g23890.1 68416.m03002 DNA topoisomerase, ATP-hydrolyzing / DNA
topoisomerase II / DNA gyrase (TOP2) identical to
SP|P30182 DNA topoisomerase II (EC 5.99.1.3)
{Arabidopsis thaliana}
Length = 1473
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 427 TRTLKSGRNV*HRYFFYPVNIVTRVLIWQARRIV*NLLRKD*SRIEITW 281
TRT + RY F ++ VTR+L + ++ + L +D RIE TW
Sbjct: 781 TRTSGGKDSASARYIFTKLSPVTRILFPKDDDLLLDYLNEDGQRIEPTW 829
>At1g79490.1 68414.m09264 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 836
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 470 EVVQAGMTHGDLSVDAYTQV 411
E+VQ +HGDLS +AY QV
Sbjct: 230 EMVQDSSSHGDLSFNAYNQV 249
>At4g13980.1 68417.m02162 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 466
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 186 QELQDQI--EQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQT 13
QE D++ E+A +E KF +Q+K + E +TE + R+K K + L+T
Sbjct: 135 QEQMDKLSREKAAIEAKLLKF--KQQKVVAKHQFEEMTEHVDDMENRQK---KLLNFLET 189
Query: 12 EVEN 1
+ N
Sbjct: 190 AIRN 193
>At3g51220.1 68416.m05607 expressed protein contains Pfam doamin
PF05701: Plant protein of unknown function (DUF827)
Length = 186
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = -2
Query: 240 RVLTGGYQSRAAXXIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQ 61
R+L G + + +QD++ +A L AE+E + + IESLT+++ +
Sbjct: 25 RILLGDNYISKSVERSSCKSIQDELVEAKENLKK----AEEENKVLSQLIESLTQEL--E 78
Query: 60 TEREKL 43
T +EKL
Sbjct: 79 TTKEKL 84
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 28.3 bits (60), Expect = 4.4
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Frame = -2
Query: 288 SHGEGSKKMFKMEKKLRVLTG-------GYQSRAAXXIKQ-------FQELQDQIEQANL 151
+HG GSK++ M+ K+++L G +S + I++ +EL+ +++Q +
Sbjct: 897 AHG-GSKEVAVMKDKIKLLEGQIKLKETALESSSNMFIEKEKNLKNRIEELETKLDQNSQ 955
Query: 150 ELSTFKFLAEQEK---AAIPRRIESLTEDISXQTEREKLLQKRYSEL 19
E+S + L QE + IESL E K +++RYSE+
Sbjct: 956 EMSENELLNGQENEDIGVLVAEIESLRECNGSMEMELKEMRERYSEI 1002
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -3
Query: 479 KEMEVVQAGMTHGDLSVDAYTQVWEECLAQVLFLPGQHRYTRANLASKKDRLESAEKRLE 300
+++E + GD + D+Y + EE L L + NLAS K+R ++++E
Sbjct: 752 EDLEKRKNDFGEGDAANDSYEKRLEELKVLALSLKEHITMAQRNLASLKERSAMRQRKIE 811
Query: 299 QNR 291
R
Sbjct: 812 AAR 814
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 350 NLASKKDRLESAEKRLEQNRNHMAKEAKKCSKWK-RNFVC*QEVTRVVP 207
+L KK +LE EK+ +Q + + + +KCS + N V Q+ + P
Sbjct: 1017 SLEDKKKKLEETEKKGQQLQESLTRMEEKCSNLESENKVLRQQAVSMAP 1065
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 120 QEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVE 4
+E + R+E LT +I + E + +R+ E++ E+E
Sbjct: 41 RENRELKERLERLTGEIEEMKDVEAEMNQRFGEMEKEIE 79
>At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = -2
Query: 198 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTERE 49
+ Q QEL+ +++Q +LS + + + I ++E+ D+S +TE E
Sbjct: 410 LDQKQELELEVQQLKSQLSVMRLVELDSGSEIVNKVETFLRDLS-ETEGE 458
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -2
Query: 183 ELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQTEVE 4
E Q Q+ + N E + + E+E++ R L E I +++LLQK +L+ + E
Sbjct: 461 ENQAQLSEINKEKDELR-VTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRE 519
Query: 3 N 1
+
Sbjct: 520 S 520
>At5g66310.1 68418.m08360 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1063
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -2
Query: 195 KQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDISXQTERE 49
K+ +L Q+EQA E+ + + E+EK + + TE ++ E +
Sbjct: 400 KEVFQLAQQLEQARSEIKDLRRMVEEEKNQEKETLSTETEGLNVLMEHQ 448
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = -2
Query: 138 FKFLAEQEKAAIPRRIESLTEDISXQTEREKLLQKRYSELQ 16
F+FL + +K+ + + ESL + E+ +L+K+Y+EL+
Sbjct: 674 FQFL-KNDKSELMKERESLVSQLCKVEEKLGVLEKKYTELE 713
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,752,636
Number of Sequences: 28952
Number of extensions: 206630
Number of successful extensions: 664
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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