Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40261
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094671-1|AAM11024.1| 1297|Drosophila melanogaster GH03947p pro...    29   3.7  
AE013599-1327|AAF58636.1| 1297|Drosophila melanogaster CG9005-PA...    29   3.7  
BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p pro...    29   4.9  

>AY094671-1|AAM11024.1| 1297|Drosophila melanogaster GH03947p
           protein.
          Length = 1297

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 252 IKQHVTTSTNA*RGTRQRDGSRARHEPRNVINVFYAAGPQTGVVLDVSPR 103
           IKQH TT++N+  G  Q DG  A+    N  NV  +      V +   PR
Sbjct: 467 IKQHTTTNSNS--GLHQEDGFSAKANVHNFPNVNVSESYSISVSVRSLPR 514


>AE013599-1327|AAF58636.1| 1297|Drosophila melanogaster CG9005-PA
           protein.
          Length = 1297

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 252 IKQHVTTSTNA*RGTRQRDGSRARHEPRNVINVFYAAGPQTGVVLDVSPR 103
           IKQH TT++N+  G  Q DG  A+    N  NV  +      V +   PR
Sbjct: 467 IKQHTTTNSNS--GLHQEDGFSAKANVHNFPNVNVSESYSISVSVRSLPR 514


>BT029727-1|ABL75784.1|  288|Drosophila melanogaster IP17596p
           protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 109 STDRNVRSKCRCSNVSCSSHYDAQLTA 29
           S + N+ + C C+N+SCSS     +T+
Sbjct: 87  SNNSNIVTNCSCNNISCSSSNTQPITS 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,877,610
Number of Sequences: 53049
Number of extensions: 363503
Number of successful extensions: 907
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)