Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40259
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    91   7e-21
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    88   5e-20
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 91.1 bits (216), Expect = 7e-21
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = +2

Query: 500 STHPIIIPRDYTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTA 637
           S  PI IPRDYTA+DLEEEHRLAY+RED+GINLHH+HWHLVYPF A
Sbjct: 173 SRTPIEIPRDYTASDLEEEHRLAYFREDLGINLHHWHWHLVYPFEA 218



 Score = 79.0 bits (186), Expect = 3e-17
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = +1

Query: 1   FDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEF 180
           FDRP EP+   KG   +VF +   +L + Y   G+ L+NRF  DA E +P+K +S +P  
Sbjct: 10  FDRPQEPVFIGKGSKKTVFDIPNDYLNDKYKPLGVSLSNRFKQDAEETVPVKKIS-IPPL 68

Query: 181 KIATQLPKDAEFSLFLPKHQEMA 249
               +L +DA FSLF+PKH+ +A
Sbjct: 69  GEILELERDANFSLFIPKHRRIA 91



 Score = 78.6 bits (185), Expect = 4e-17
 Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
 Frame = +3

Query: 255 LLGVLMDV--PENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVF 428
           + G L+D+      + DLLS   +AR  +NP LF+Y  SVA++HR+DT+ + + +F E F
Sbjct: 90  IAGRLIDIFLGMRNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESF 149

Query: 429 PSKFLDSQVFTQARETAAVIP 491
           P K++DS+VF +ARE A V+P
Sbjct: 150 PDKYVDSKVFAKAREEATVVP 170


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 88.2 bits (209), Expect = 5e-20
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = +2

Query: 500 STHPIIIPRDYTATDLEEEHRLAYWREDIGINLHHYHWHLVYPF 631
           S  PI IP+D+TA+DL+EEHR+AYWREDIG+NLHH+HWHLVYPF
Sbjct: 173 SRTPIEIPQDFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPF 216



 Score = 80.2 bits (189), Expect = 1e-17
 Identities = 38/87 (43%), Positives = 55/87 (63%)
 Frame = +1

Query: 1   FDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEF 180
           FDRP EP   PKG N  VF +   FL E Y   G+++ NRFG+ A+EKIPLK+++  P+ 
Sbjct: 11  FDRPQEPAFMPKG-NKEVFDVPNNFLPERYKPIGVQIANRFGEQANEKIPLKDITP-PDL 68

Query: 181 KIATQLPKDAEFSLFLPKHQEMANDFL 261
           +    L +   FSLF+PKH+++A   +
Sbjct: 69  EGILDLGRHENFSLFIPKHRKVAGKLI 95



 Score = 78.6 bits (185), Expect = 4e-17
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = +3

Query: 291 LQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQAR 470
           + DLLS   F R  +NP LF Y +SVAL+HR DT+ + + +F  VFP K++DSQVF +AR
Sbjct: 104 IDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQNLDLPSFIHVFPDKYVDSQVFARAR 163

Query: 471 ETAAVIP 491
           E A ++P
Sbjct: 164 EEAHIVP 170


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 251 MTSWRSHGCTRERITRFAIDMRLCT 325
           MT+W  +     +     ID RLCT
Sbjct: 643 MTNWAFYRKAEGKFVPEHIDQRLCT 667


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,537
Number of Sequences: 336
Number of extensions: 3624
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)