Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40259
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical p... 29 2.9
AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical... 29 2.9
AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical ... 28 6.7
AC090999-24|AAK26151.1| 502|Caenorhabditis elegans Hypothetical... 28 6.7
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 28 6.7
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 27 8.9
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 27 8.9
Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical
protein T09E11.4 protein.
Length = 671
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 276 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNF 416
+ EN L+ + C + NL FN C +A K+++K +
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLKEY 493
>AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical
protein Y56A3A.33 protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 452 LGIQEFRGKYFCKILNSDFSGITSVHQCHRVTIVEQLRVQVYSCKG 315
L +Q KY CK + S+ SG +S+ H + R + C G
Sbjct: 298 LSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLATRHLFFYCHG 343
>AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical
protein Y52B11A.1 protein.
Length = 179
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 293 TRFAIDMRLCTSKPEPSVVQLLLL 364
TRF I MR TSK EP++ +LL L
Sbjct: 96 TRFIISMRDFTSKEEPTLSELLNL 119
>AC090999-24|AAK26151.1| 502|Caenorhabditis elegans Hypothetical
protein Y82E9BR.1 protein.
Length = 502
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 209 LNSHYFYLNIKKWQMTSWRSHGCTRERITRFAIDMR-LC 322
LN H++Y + K+ Q+++ RER+ A D+ LC
Sbjct: 227 LNVHFYYEHAKREQLSNLELESSQRERLVALANDLTGLC 265
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 479 CGFTSLSEYLGIQEFRGKYFCKILN---SDFSGITSVHQCHRVTIV 351
CGFT+L+ E+ K +LN + F + S+HQC R+ I+
Sbjct: 250 CGFTNLAS-----EYNPKDLVLMLNELFARFDKVASIHQCMRIKIL 290
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 508 MRGTSGGITAAVSRA*VNTWESKNLEGNTS 419
+RG G T + A + W+S NLE N++
Sbjct: 1161 IRGLGGSATTGTAAATQSEWQSANLEANST 1190
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
T04A11.3 protein.
Length = 1014
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 508 MRGTSGGITAAVSRA*VNTWESKNLEGNTS 419
+RG G T + A + W+S NLE N++
Sbjct: 967 IRGLGGSATTGTAAATQSEWQSANLEANST 996
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 508 MRGTSGGITAAVSRA*VNTWESKNLEGNTS 419
+RG G T + A + W+S NLE N++
Sbjct: 1161 IRGLGGSATTGTAAATQSEWQSANLEANST 1190
>Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical
protein F02D10.4 protein.
Length = 369
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 1 FDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASE 141
++R + TP + N + TEQ+ T D ++ L+ R+GD SE
Sbjct: 90 YERITQAYDTPGRQENGG-RYTEQYDTVDQSSKREHLSQRYGDHVSE 135
>AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical
protein R02D3.3 protein.
Length = 532
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 324 RVNLNPQLFNYCYSV-ALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARE 473
R+NLNP++ YS + +++ V + E F KF S F + RE
Sbjct: 197 RLNLNPEIIQAIYSTYPAVQKKNLELVPHEMSEENFWKKFFQSHYFHRERE 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,674,549
Number of Sequences: 27780
Number of extensions: 337645
Number of successful extensions: 915
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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