Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40259
         (658 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g16160.1 68415.m01852 hypothetical protein includes At2g06610...    29   2.1  
At2g35110.1 68415.m04307 HEM protein-related weak similarity to ...    29   2.7  
At3g59100.1 68416.m06589 glycosyl transferase family 48 protein ...    29   3.6  
At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical ...    29   3.6  
At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical ...    29   3.6  
At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical ...    29   3.6  
At2g28780.1 68415.m03499 expressed protein                             29   3.6  
At1g23090.1 68414.m02887 sulfate transporter, putative similar t...    29   3.6  
At3g51895.1 68416.m05692 sulfate transporter (ST1) identical to ...    27   8.3  

>At2g16160.1 68415.m01852 hypothetical protein includes At2g06610,
           At5g28266, At3g42620, At4g07696, At2g06690, At2g16160,
           At2g05480, At2g12140, At1g45080, At2g16330
          Length = 217

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/68 (29%), Positives = 26/68 (38%)
 Frame = +1

Query: 70  QFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMA 249
           QFL E      IE+ N   D    K+P K + K   F +  Q  +  EF  F  +     
Sbjct: 114 QFLPEYVIGALIEVGNLTKDYRGRKLPFKIMDKQKFFNVKHQNDQAFEFQRFFQRLTGPQ 173

Query: 250 NDFLAFSW 273
           N     SW
Sbjct: 174 NIIALVSW 181


>At2g35110.1 68415.m04307 HEM protein-related weak similarity to
           Membrane-associated protein Hem (Dhem-2)
           (Swiss-Prot:P55162) [Drosophila melanogaster]; weak
           similarity to Nck-associated protein 1 (NAP 1)
           (p125Nap1) (Membrane-associated protein HEM-2)
           (Swiss-Prot:P55161) [Rattus norvegicus]
          Length = 1339

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 312 CAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLD 446
           CAF RVNL  +        ++    DTRK+R + F   +  +F D
Sbjct: 202 CAFVRVNLFAEKVLEAVGPSIFLSADTRKLRNEGFLSPYHPRFPD 246


>At3g59100.1 68416.m06589 glycosyl transferase family 48 protein
           contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1934

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 590 INLH--HYHWHLVYPFTANDLSIV 655
           +NLH  HY WH  +P   N++ +V
Sbjct: 715 MNLHIGHYQWHEFFPHATNNIGVV 738


>At3g53570.3 68416.m05915 protein kinase (AFC1) (AME2) identical to
           protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
          Length = 453

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 166 KLPEFKIATQLPKDAEFSLFLPKHQEM-ANDFLAFSWMYQRTNYKICYRH 312
           K+P++K  ++  KD  +   LPK   +   DF + ++ +Q  NY +  RH
Sbjct: 241 KIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRH 290


>At3g53570.2 68416.m05916 protein kinase (AFC1) (AME2) identical to
           protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
          Length = 467

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 166 KLPEFKIATQLPKDAEFSLFLPKHQEM-ANDFLAFSWMYQRTNYKICYRH 312
           K+P++K  ++  KD  +   LPK   +   DF + ++ +Q  NY +  RH
Sbjct: 255 KIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRH 304


>At3g53570.1 68416.m05917 protein kinase (AFC1) (AME2) identical to
           protein kinase AFC1 (EC 2.7.1.-) [Arabidopsis thaliana]
          Length = 467

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 166 KLPEFKIATQLPKDAEFSLFLPKHQEM-ANDFLAFSWMYQRTNYKICYRH 312
           K+P++K  ++  KD  +   LPK   +   DF + ++ +Q  NY +  RH
Sbjct: 255 KIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRH 304


>At2g28780.1 68415.m03499 expressed protein
          Length = 796

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 391 PEKSELRILQKYFPLNSWIPKYSLKLVKPQL 483
           PE++++++L+  F   SWI  +  K + P L
Sbjct: 362 PEENKVKVLENKFKTRSWISDWDSKKIMPAL 392


>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
           sulfate transporter [Arabidopsis thaliana] GI:2285885;
           contains Pfam profiles PF00916: Sulfate transporter
           family, PF01740: STAS domain
          Length = 631

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 391 PEKSEL-RILQKYFPLNSWIPKYSLKLVKPQLL 486
           P +++L R  Q  FP+  W P+YS  L+K  ++
Sbjct: 39  PNRTKLIRAAQYIFPILQWCPEYSFSLLKSDVV 71


>At3g51895.1 68416.m05692 sulfate transporter (ST1) identical to
           sulfate transporter [Arabidopsis thaliana] GI:2285885
          Length = 658

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 421 KYF-PLNSWIPKYSLKLVKPQLL 486
           KYF P+  W P+Y+LK  K  L+
Sbjct: 65  KYFLPIFEWAPRYNLKFFKSDLI 87


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,805,760
Number of Sequences: 28952
Number of extensions: 314474
Number of successful extensions: 878
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)