Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40258
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q86BI3 Cluster: CG5215-PB, isoform B; n=5; Sophophora|R... 46 6e-04
UniRef50_Q16ZI1 Cluster: Double-stranded RNA-binding protein zn7... 46 6e-04
UniRef50_Q96KR1 Cluster: Zinc finger RNA-binding protein; n=56; ... 46 8e-04
UniRef50_UPI0000D8B018 Cluster: RIKEN cDNA 9130206N08 gene; n=2;... 44 0.003
UniRef50_Q4RUC4 Cluster: Chromosome 1 SCAF14995, whole genome sh... 44 0.003
UniRef50_UPI0000519E62 Cluster: PREDICTED: similar to zinc finge... 43 0.008
UniRef50_UPI0000E4A83E Cluster: PREDICTED: similar to interleuki... 41 0.024
UniRef50_Q5DGX6 Cluster: SJCHGC06154 protein; n=1; Schistosoma j... 41 0.024
UniRef50_UPI0000D577C4 Cluster: PREDICTED: similar to zinc finge... 40 0.041
UniRef50_Q9UPR6 Cluster: Protein KIAA1086; n=4; Eutheria|Rep: Pr... 39 0.13
UniRef50_A5WV30 Cluster: Novel protein; n=9; Euteleostomi|Rep: N... 38 0.22
UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3; ... 38 0.22
UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome s... 37 0.38
UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding prote... 37 0.51
UniRef50_Q9N2W0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.67
UniRef50_UPI0000E47D98 Cluster: PREDICTED: similar to fat-free p... 35 2.0
UniRef50_Q6IGJ5 Cluster: HDC06178; n=1; Drosophila melanogaster|... 33 6.2
>UniRef50_Q86BI3 Cluster: CG5215-PB, isoform B; n=5; Sophophora|Rep:
CG5215-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 884
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
LT SAQ FLR IAFRQI+KVL MEPLP P
Sbjct: 801 LTVSAQLFLRYIAFRQIYKVLGMEPLPAMKFPMRP 835
>UniRef50_Q16ZI1 Cluster: Double-stranded RNA-binding protein zn72d;
n=3; Culicidae|Rep: Double-stranded RNA-binding protein
zn72d - Aedes aegypti (Yellowfever mosquito)
Length = 884
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
+T SAQ FLR +AFRQIHKVL MEPLP
Sbjct: 801 ITVSAQMFLRFMAFRQIHKVLGMEPLP 827
>UniRef50_Q96KR1 Cluster: Zinc finger RNA-binding protein; n=56;
Eumetazoa|Rep: Zinc finger RNA-binding protein - Homo
sapiens (Human)
Length = 1057
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMR 98
+T+SAQ+ LR +AFRQIHKVL M+PLP+ + R
Sbjct: 989 ITSSAQKALRLLAFRQIHKVLGMDPLPQMSQR 1020
>UniRef50_UPI0000D8B018 Cluster: RIKEN cDNA 9130206N08 gene; n=2;
Murinae|Rep: RIKEN cDNA 9130206N08 gene - Mus musculus
Length = 361
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
LTASAQ+ LR +AFRQIHKVL ME LP
Sbjct: 297 LTASAQRALRLVAFRQIHKVLHMEQLP 323
>UniRef50_Q4RUC4 Cluster: Chromosome 1 SCAF14995, whole genome shotgun
sequence; n=4; Euteleostomi|Rep: Chromosome 1 SCAF14995,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1082
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
+T +AQQ LR +AFRQIHK+L MEPLP
Sbjct: 1026 ITINAQQALRLLAFRQIHKILGMEPLP 1052
>UniRef50_UPI0000519E62 Cluster: PREDICTED: similar to zinc finger
RNA binding protein; n=2; Apocrita|Rep: PREDICTED:
similar to zinc finger RNA binding protein - Apis
mellifera
Length = 928
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
+TASAQ LR +AFRQIHKVL ME LP
Sbjct: 859 ITASAQHALRLVAFRQIHKVLGMEQLP 885
>UniRef50_UPI0000E4A83E Cluster: PREDICTED: similar to interleukin
enhancer binding factor 3, partial; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
interleukin enhancer binding factor 3, partial -
Strongylocentrotus purpuratus
Length = 936
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKAN 92
+TASAQ LR I FRQ+HKVL MEP+ N
Sbjct: 855 ITASAQHALRLIVFRQVHKVLAMEPMYSQN 884
>UniRef50_Q5DGX6 Cluster: SJCHGC06154 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06154 protein - Schistosoma
japonicum (Blood fluke)
Length = 164
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKAN 92
+T SAQ +RQIAF+Q+HKVL +EPL ++
Sbjct: 55 ITVSAQYIIRQIAFKQLHKVLGIEPLDSSH 84
>UniRef50_UPI0000D577C4 Cluster: PREDICTED: similar to zinc finger
RNA binding protein; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to zinc finger RNA binding protein -
Tribolium castaneum
Length = 889
Score = 40.3 bits (90), Expect = 0.041
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
LT SAQ LR IA+RQI+KVL M+PLP
Sbjct: 849 LTCSAQYALRLIAYRQIYKVLGMDPLP 875
>UniRef50_Q9UPR6 Cluster: Protein KIAA1086; n=4; Eutheria|Rep:
Protein KIAA1086 - Homo sapiens (Human)
Length = 902
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
+TASAQ LR +AFRQ HKVL M+ LP
Sbjct: 839 VTASAQHALRMLAFRQTHKVLGMDLLP 865
>UniRef50_A5WV30 Cluster: Novel protein; n=9; Euteleostomi|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1010
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
+TA+AQ LR +AFRQIHKVL M LP
Sbjct: 948 VTANAQHALRLLAFRQIHKVLGMGSLP 974
>UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3;
n=75; Euteleostomi|Rep: Interleukin enhancer-binding
factor 3 - Homo sapiens (Human)
Length = 894
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome
shotgun sequence; n=5; root|Rep: Chromosome 12
SCAF15007, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 850
Score = 37.1 bits (82), Expect = 0.38
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP--KANMRRAPGS 113
+T SAQ LR +AF Q++KVL+M+PLP K + R GS
Sbjct: 404 VTESAQHALRLLAFGQLYKVLNMDPLPACKPSPRLLEGS 442
>UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding protein;
n=51; Euteleostomi|Rep: Spermatid perinuclear
RNA-binding protein - Homo sapiens (Human)
Length = 672
Score = 36.7 bits (81), Expect = 0.51
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 306 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 334
>UniRef50_Q9N2W0 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 608
Score = 36.3 bits (80), Expect = 0.67
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPL 80
LTA AQ F+RQIAF QIH++L ++ L
Sbjct: 536 LTALAQNFVRQIAFNQIHEILGIDRL 561
>UniRef50_UPI0000E47D98 Cluster: PREDICTED: similar to fat-free
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to fat-free protein -
Strongylocentrotus purpuratus
Length = 1151
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 572 TSHMLPRAGMCNFTSLLSQGNQYFHTSYCCRD-RDSIEICLNHLIRALPLQSS 417
T+H++ G CN L+ TS C + +D+ ++ LNH ++A LQ S
Sbjct: 557 TTHIIQLLGTCNAQFLIEDSRGLTQTSTLCLEAKDAAQLLLNHYVQAQGLQIS 609
>UniRef50_Q6IGJ5 Cluster: HDC06178; n=1; Drosophila
melanogaster|Rep: HDC06178 - Drosophila melanogaster
(Fruit fly)
Length = 131
Score = 33.1 bits (72), Expect = 6.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +1
Query: 85 RRTCDGRLEVPAQGRRSNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK*SIFRRHDPQLAI 264
RR D V G N DN D N I +K+DC +K + + ++A
Sbjct: 15 RRNKDDENGVEVNG--CNKDNNTDNNNNNNSISSLPKKADCKKKGEK---MAQRENKMAS 69
Query: 265 TLMYR*PH----GTDIVGIWSCI 321
L+ PH G ++GI SCI
Sbjct: 70 LLLSSSPHRCSCGGSVIGIGSCI 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,453,169
Number of Sequences: 1657284
Number of extensions: 13756761
Number of successful extensions: 33505
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 32368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33490
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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