Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40258
(668 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.56
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.56
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.56
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.56
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 0.98
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 0.98
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 0.98
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 1.7
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 1.7
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 1.7
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 2.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.1
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.56
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 288 RHRYRWNLVMYM 323
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.56
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 288 RHRYRWNLVMYM 323
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.56
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 288 RHRYRWNLVMYM 323
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.56
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 288 RHRYRWNLVMYM 323
RHR RW+ VMYM
Sbjct: 693 RHRKRWSQVMYM 704
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 133 SNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK 225
+N+D + D +G+G +E D +T +
Sbjct: 178 ANSDEQDDGDDGQGSSTNNDEDDDDEETGDR 208
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 133 SNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK 225
+N+D + D +G+G +E D +T +
Sbjct: 178 ANSDEQDDGDDGQGSSTNNDEDDDDEETGDR 208
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.98
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 133 SNTDNEHDAPNGEGKIVKTEEKSDCSDTNKK 225
+N+D + D +G+G +E D +T +
Sbjct: 178 ANSDEQDDGDDGQGSSTNNDEDDDDEETGDR 208
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = -1
Query: 485 CRDRDSIEICLNHLIRALPLQSSLVCSLCVPS 390
CR+ + IC H L C +C P+
Sbjct: 112 CREGEPPRICYYHFTLELYTVLGAACQVCTPN 143
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = -1
Query: 485 CRDRDSIEICLNHLIRALPLQSSLVCSLCVPS 390
CR+ + IC H L C +C P+
Sbjct: 112 CREGEPPRICYYHFTLELYTVLGAACQVCTPN 143
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 306 NLVMYMPDIHVIFNIEFISFLYFLYY 383
+L+ Y P +IF + F+ Y+ YY
Sbjct: 82 HLLFYCP--FIIFTVHFLLCTYYFYY 105
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 343 SILNSFPFYIFYIIQIDGTHKEQTRE 420
S LN+F F IF + + HK T E
Sbjct: 292 SFLNNFYFIIFQVFESFYLHKATTLE 317
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 284 HTAPISLESGHVYARYTCNF 343
H AP+ G VY + NF
Sbjct: 2525 HVAPLYYYPGDVYDYFNANF 2544
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,520
Number of Sequences: 336
Number of extensions: 3789
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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