Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40258
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger pr... 46 1e-04
BC062986-1|AAH62986.1| 606|Homo sapiens ZFR protein protein. 44 4e-04
BC051893-1|AAH51893.1| 631|Homo sapiens ZFR protein protein. 44 4e-04
AL137258-1|CAB70659.1| 105|Homo sapiens hypothetical protein pr... 44 4e-04
AK025481-1|BAB15147.1| 214|Homo sapiens protein ( Homo sapiens ... 44 4e-04
AF100742-1|AAD40385.1| 418|Homo sapiens M-phase phosphoprotein ... 44 4e-04
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 39 0.019
X98265-1|CAA66918.1| 611|Homo sapiens M-phase phosphoprotein 4 ... 38 0.032
X98264-1|CAA66917.1| 440|Homo sapiens M-phase phosphoprotein 4 ... 38 0.032
U10324-1|AAA20994.1| 671|Homo sapiens NF90 protein protein. 38 0.032
BC064836-1|AAH64836.1| 706|Homo sapiens ILF3 protein protein. 38 0.032
BC048314-1|AAH48314.1| 351|Homo sapiens ILF3 protein protein. 38 0.032
AJ271747-1|CAC01407.1| 591|Homo sapiens double stranded RNA bin... 38 0.032
AJ271746-1|CAC01406.1| 690|Homo sapiens double-stranded RNA bin... 38 0.032
AJ271745-1|CAC01405.1| 702|Homo sapiens double-stranded RNA bin... 38 0.032
AJ271744-1|CAC01404.1| 564|Homo sapiens DRBP76 alpha protein. 38 0.032
AF320247-1|AAK07425.1| 894|Homo sapiens 110 kDa NFAR protein pr... 38 0.032
AF320244-1|AAK07424.1| 702|Homo sapiens 90 kDa NFAR protein pro... 38 0.032
AF202445-3|AAF82686.1| 515|Homo sapiens dsRNA binding protein N... 38 0.032
AF202445-2|AAF82685.1| 709|Homo sapiens dsRNA binding protein N... 38 0.032
AF202445-1|AAF82687.1| 576|Homo sapiens dsRNA binding protein T... 38 0.032
AF167570-1|AAD51099.1| 894|Homo sapiens nuclear factor associat... 38 0.032
AF167569-1|AAD51098.1| 702|Homo sapiens nuclear factor associat... 38 0.032
AF147209-1|AAD33966.1| 702|Homo sapiens double-stranded RNA-bin... 38 0.032
AF141870-1|AAD37575.1| 764|Homo sapiens translational control p... 38 0.032
AB209062-1|BAD92299.1| 450|Homo sapiens interleukin enhancer bi... 38 0.032
BC108731-1|AAI08732.1| 589|Homo sapiens STRBP protein protein. 37 0.075
BC017732-1|AAH17732.1| 672|Homo sapiens spermatid perinuclear R... 37 0.075
BC002693-1|AAH02693.2| 615|Homo sapiens STRBP protein protein. 37 0.075
AL365338-5|CAH70300.1| 672|Homo sapiens spermatid perinuclear R... 37 0.075
AL365338-4|CAH70299.1| 658|Homo sapiens spermatid perinuclear R... 37 0.075
AK027890-1|BAB55434.1| 672|Homo sapiens protein ( Homo sapiens ... 37 0.075
AK024285-1|BAB14873.1| 405|Homo sapiens protein ( Homo sapiens ... 37 0.075
AK002169-1|BAA92120.1| 490|Homo sapiens spermatid perinuclear R... 37 0.075
AF333337-1|AAK20832.1| 673|Homo sapiens spermatid perinuclear R... 37 0.075
BX571742-1|CAE11868.1| 902|Homo sapiens hypothetical protein pr... 30 8.6
BC040956-1|AAH40956.1| 699|Homo sapiens zinc finger CCCH-type, ... 30 8.6
BC033105-1|AAH33105.1| 699|Homo sapiens zinc finger CCCH-type, ... 30 8.6
BC030197-1|AAH30197.1| 316|Homo sapiens GPR150 protein protein. 30 8.6
BC025308-1|AAH25308.1| 699|Homo sapiens zinc finger CCCH-type, ... 30 8.6
BC002935-1|AAH02935.1| 447|Homo sapiens ZC3HAV1 protein protein. 30 8.6
AB065678-1|BAC05903.1| 434|Homo sapiens seven transmembrane hel... 30 8.6
>AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger protein
protein.
Length = 1057
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMR 98
+T+SAQ+ LR +AFRQIHKVL M+PLP+ + R
Sbjct: 989 ITSSAQKALRLLAFRQIHKVLGMDPLPQMSQR 1020
>BC062986-1|AAH62986.1| 606|Homo sapiens ZFR protein protein.
Length = 606
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMR 98
+T+SAQ LR +AFRQIHKVL M+PLP+ + R
Sbjct: 542 ITSSAQFALRLLAFRQIHKVLGMDPLPQMSQR 573
>BC051893-1|AAH51893.1| 631|Homo sapiens ZFR protein protein.
Length = 631
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMR 98
+T+SAQ LR +AFRQIHKVL M+PLP+ + R
Sbjct: 567 ITSSAQFALRLLAFRQIHKVLGMDPLPQMSQR 598
>AL137258-1|CAB70659.1| 105|Homo sapiens hypothetical protein
protein.
Length = 105
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMR 98
+T+SAQ LR +AFRQIHKVL M+PLP+ + R
Sbjct: 41 ITSSAQFALRLLAFRQIHKVLGMDPLPQMSQR 72
>AK025481-1|BAB15147.1| 214|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21828 fis, clone HEP01453. ).
Length = 214
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMR 98
+T+SAQ LR +AFRQIHKVL M+PLP+ + R
Sbjct: 150 ITSSAQFALRLLAFRQIHKVLGMDPLPQMSQR 181
>AF100742-1|AAD40385.1| 418|Homo sapiens M-phase phosphoprotein
homolog protein.
Length = 418
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMR 98
+T+SAQ LR +AFRQIHKVL M+PLP+ + R
Sbjct: 354 ITSSAQFALRLLAFRQIHKVLGMDPLPQMSQR 385
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 38.7 bits (86), Expect = 0.019
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLP 83
+TASAQ LR +AFRQ HKVL M+ LP
Sbjct: 839 VTASAQHALRMLAFRQTHKVLGMDLLP 865
>X98265-1|CAA66918.1| 611|Homo sapiens M-phase phosphoprotein 4
protein.
Length = 611
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>X98264-1|CAA66917.1| 440|Homo sapiens M-phase phosphoprotein 4
protein.
Length = 440
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>U10324-1|AAA20994.1| 671|Homo sapiens NF90 protein protein.
Length = 671
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 315 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 348
>BC064836-1|AAH64836.1| 706|Homo sapiens ILF3 protein protein.
Length = 706
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>BC048314-1|AAH48314.1| 351|Homo sapiens ILF3 protein protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AJ271747-1|CAC01407.1| 591|Homo sapiens double stranded RNA
binding nuclear protein, ILF3 protein.
Length = 591
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 11 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 44
>AJ271746-1|CAC01406.1| 690|Homo sapiens double-stranded RNA
binding nuclear protein DRBP76 delta protein.
Length = 690
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AJ271745-1|CAC01405.1| 702|Homo sapiens double-stranded RNA
binding nuclear protein DRBP76 protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AJ271744-1|CAC01404.1| 564|Homo sapiens DRBP76 alpha protein.
Length = 564
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 180 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 213
>AF320247-1|AAK07425.1| 894|Homo sapiens 110 kDa NFAR protein
protein.
Length = 894
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AF320244-1|AAK07424.1| 702|Homo sapiens 90 kDa NFAR protein
protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AF202445-3|AAF82686.1| 515|Homo sapiens dsRNA binding protein
NFAR-1/DRB76 protein.
Length = 515
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 127 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 160
>AF202445-2|AAF82685.1| 709|Homo sapiens dsRNA binding protein
NFAR-2/MPP4 protein.
Length = 709
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 127 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 160
>AF202445-1|AAF82687.1| 576|Homo sapiens dsRNA binding protein
TCP-80 isoform protein.
Length = 576
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 127 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 160
>AF167570-1|AAD51099.1| 894|Homo sapiens nuclear factor associated
with dsRNA NFAR-2 protein.
Length = 894
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AF167569-1|AAD51098.1| 702|Homo sapiens nuclear factor associated
with dsRNA NFAR-1 protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AF147209-1|AAD33966.1| 702|Homo sapiens double-stranded
RNA-binding nuclear protein DRBP76 protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AF141870-1|AAD37575.1| 764|Homo sapiens translational control
protein 80 protein.
Length = 764
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 314 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 347
>AB209062-1|BAD92299.1| 450|Homo sapiens interleukin enhancer
binding factor 3 isoform c variant protein.
Length = 450
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKANMRRAP 107
+T SAQ LR AF Q+HKVL M+PLP + M + P
Sbjct: 323 ITQSAQHALRLAAFGQLHKVLGMDPLP-SKMPKKP 356
>BC108731-1|AAI08732.1| 589|Homo sapiens STRBP protein protein.
Length = 589
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 306 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 334
>BC017732-1|AAH17732.1| 672|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 672
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 306 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 334
>BC002693-1|AAH02693.2| 615|Homo sapiens STRBP protein protein.
Length = 615
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 249 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 277
>AL365338-5|CAH70300.1| 672|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 672
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 306 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 334
>AL365338-4|CAH70299.1| 658|Homo sapiens spermatid perinuclear RNA
binding protein protein.
Length = 658
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 292 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 320
>AK027890-1|BAB55434.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ14984 fis, clone Y79AA1000349, highly similar to
M.musculus Spnr mRNA for RNA binding protein. ).
Length = 672
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 306 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 334
>AK024285-1|BAB14873.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ14223 fis, clone NT2RP3004013, highly similar to
M.musculus Spnr mRNA for RNA binding protein. ).
Length = 405
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 39 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 67
>AK002169-1|BAA92120.1| 490|Homo sapiens spermatid perinuclear
RNA-binding protein. protein.
Length = 490
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 124 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 152
>AF333337-1|AAK20832.1| 673|Homo sapiens spermatid perinuclear
RNA-binding protein protein.
Length = 673
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 3 LTASAQQFLRQIAFRQIHKVLDMEPLPKA 89
+T SAQ LR AF QI+KVL+M+PLP +
Sbjct: 307 ITHSAQHALRLSAFGQIYKVLEMDPLPSS 335
>BX571742-1|CAE11868.1| 902|Homo sapiens hypothetical protein
protein.
Length = 902
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 497 TSYCCRDRDSIEICLNHLIRALPLQSS 417
TS D DS EICL+HL + PL S
Sbjct: 500 TSSRVDDHDSEEICLDHLCKGCPLNGS 526
>BC040956-1|AAH40956.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 497 TSYCCRDRDSIEICLNHLIRALPLQSS 417
TS D DS EICL+HL + PL S
Sbjct: 500 TSSRVDDHDSEEICLDHLCKGCPLNGS 526
>BC033105-1|AAH33105.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 497 TSYCCRDRDSIEICLNHLIRALPLQSS 417
TS D DS EICL+HL + PL S
Sbjct: 500 TSSRVDDHDSEEICLDHLCKGCPLNGS 526
>BC030197-1|AAH30197.1| 316|Homo sapiens GPR150 protein protein.
Length = 316
Score = 29.9 bits (64), Expect = 8.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 108 QAPVACSPWGAAPCRAP 58
QAP A +PW A+P RAP
Sbjct: 265 QAPAAAAPWSASPGRAP 281
>BC025308-1|AAH25308.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 497 TSYCCRDRDSIEICLNHLIRALPLQSS 417
TS D DS EICL+HL + PL S
Sbjct: 500 TSSRVDDHDSEEICLDHLCKGCPLNGS 526
>BC002935-1|AAH02935.1| 447|Homo sapiens ZC3HAV1 protein protein.
Length = 447
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 497 TSYCCRDRDSIEICLNHLIRALPLQSS 417
TS D DS EICL+HL + PL S
Sbjct: 200 TSSRVDDHDSEEICLDHLCKGCPLNGS 226
>AB065678-1|BAC05903.1| 434|Homo sapiens seven transmembrane helix
receptor protein.
Length = 434
Score = 29.9 bits (64), Expect = 8.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 108 QAPVACSPWGAAPCRAP 58
QAP A +PW A+P RAP
Sbjct: 265 QAPAAAAPWSASPGRAP 281
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,515,738
Number of Sequences: 237096
Number of extensions: 2180788
Number of successful extensions: 4439
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4439
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -