Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40258
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   6.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   8.0  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 354 FISFLYFLYYPN*WNTQGAD 413
           +I FL+ + + N  NT+GAD
Sbjct: 300 YIDFLFQVLHCNMENTEGAD 319


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 251 GSCLLNIDYFLLVSEQSDF 195
           GSC   ID   + +E S+F
Sbjct: 187 GSCAFGIDMSSMTNENSEF 205


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 572 FIYVLVELCDLVGARAYCLILLMVSIPF 655
           F   L + C++V     C IL  + +PF
Sbjct: 354 FRSALEDYCNIVATHLVCGILGSILVPF 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,255
Number of Sequences: 438
Number of extensions: 4381
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)