Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40257
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    26   1.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.8  

>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +2

Query: 257 LEKRVIKTAKRRTTAPTDENNKTQGLFSGFGAFNKAPSSFD 379
           L KR I+ A   TT P D      G  S      K P+S +
Sbjct: 133 LNKRKIRNASASTTGPPDAEANAPGSGSSLEKKKKKPNSLN 173


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
 Frame = +3

Query: 147  MSVKRQATTDLNHENWDQEDPEENKEMGTFKAA--------PKDYWKSVLLKQQKDERRP 302
            +  +R   T  N + W++   ++   + TFK A         KD  K  L+KQ+K   + 
Sbjct: 833  LEFERSKDTSKNVQRWERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMKQEKAAHKT 892

Query: 303  LL 308
            L+
Sbjct: 893  LV 894


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 225 SPYFLQDLLDPNFHGSNPSW 166
           SP FL D  DPN    NP+W
Sbjct: 98  SPQFLTDFHDPN----NPTW 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,554
Number of Sequences: 2352
Number of extensions: 9052
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)