Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40257
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070546-1|AAL48017.1|  564|Drosophila melanogaster LD27030p pro...    49   5e-06
AE013599-592|AAF59131.1|  564|Drosophila melanogaster CG2158-PA ...    49   5e-06
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr...    29   7.2  
AY095065-1|AAM11393.1|  257|Drosophila melanogaster RE08418p pro...    29   7.2  
AE014298-1049|AAN09213.1|  257|Drosophila melanogaster CG11387-P...    29   7.2  
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P...    29   7.2  

>AY070546-1|AAL48017.1|  564|Drosophila melanogaster LD27030p
           protein.
          Length = 564

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = +3

Query: 147 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDYWKSVLLKQQK 287
           M+ KRQAT++LNHENWD E  EE +E GTF+ A ++  K+ ++K+ +
Sbjct: 1   MAGKRQATSNLNHENWDLE--EEPEERGTFRTATEEELKTRVIKKAR 45



 Score = 35.1 bits (77), Expect = 0.083
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
 Frame = +2

Query: 227 GNF*SCTQGLLEKRVIKTAKRR-----TTAPTD-ENNKT---QGLFSGFGAFNK------ 361
           G F + T+  L+ RVIK A+R+     + A  D    KT   + +FSGF  F K      
Sbjct: 26  GTFRTATEEELKTRVIKKARRKIAGGSSAAEEDGAEEKTAEPKSVFSGFSGFGKPAASPA 85

Query: 362 APSSFDFLANLTKDSKSNATTTSAESGSAGLFSN 463
           A S F FLAN+T  + ++++     + S G  S+
Sbjct: 86  AGSPFSFLANVTAPATTSSSEPKKSAFSFGFSSS 119


>AE013599-592|AAF59131.1|  564|Drosophila melanogaster CG2158-PA
           protein.
          Length = 564

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = +3

Query: 147 MSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDYWKSVLLKQQK 287
           M+ KRQAT++LNHENWD E  EE +E GTF+ A ++  K+ ++K+ +
Sbjct: 1   MAGKRQATSNLNHENWDLE--EEPEERGTFRTATEEELKTRVIKKAR 45



 Score = 35.1 bits (77), Expect = 0.083
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
 Frame = +2

Query: 227 GNF*SCTQGLLEKRVIKTAKRR-----TTAPTD-ENNKT---QGLFSGFGAFNK------ 361
           G F + T+  L+ RVIK A+R+     + A  D    KT   + +FSGF  F K      
Sbjct: 26  GTFRTATEEELKTRVIKKARRKIAGGSSAAEEDGAEEKTAEPKSVFSGFSGFGKPAASPA 85

Query: 362 APSSFDFLANLTKDSKSNATTTSAESGSAGLFSN 463
           A S F FLAN+T  + ++++     + S G  S+
Sbjct: 86  AGSPFSFLANVTAPATTSSSEPKKSAFSFGFSSS 119


>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
           protein.
          Length = 2175

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 165 ATTDLNHENWDQEDPEENKEMG 230
           ATT   H+  D ED EENK+ G
Sbjct: 318 ATTQQQHQQQDTEDLEENKDAG 339


>AY095065-1|AAM11393.1|  257|Drosophila melanogaster RE08418p
           protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 165 ATTDLNHENWDQEDPEENKEMG 230
           ATT   H+  D ED EENK+ G
Sbjct: 130 ATTQQQHQQQDTEDLEENKDAG 151


>AE014298-1049|AAN09213.1|  257|Drosophila melanogaster CG11387-PB,
           isoform B protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 165 ATTDLNHENWDQEDPEENKEMG 230
           ATT   H+  D ED EENK+ G
Sbjct: 130 ATTQQQHQQQDTEDLEENKDAG 151


>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
           isoform A protein.
          Length = 2175

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 165 ATTDLNHENWDQEDPEENKEMG 230
           ATT   H+  D ED EENK+ G
Sbjct: 318 ATTQQQHQQQDTEDLEENKDAG 339


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,585,570
Number of Sequences: 53049
Number of extensions: 421073
Number of successful extensions: 923
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)