Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40255
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 101 2e-21
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 101 2e-21
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 101 2e-21
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 101 2e-21
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 101 2e-21
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 87 4e-17
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 55 2e-07
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 55 2e-07
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 55 2e-07
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 44 3e-04
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 43 0.001
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 43 0.001
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 43 0.001
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 43 0.001
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 43 0.001
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 43 0.001
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 37 0.066
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 34 0.47
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 34 0.47
AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein pr... 30 7.6
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 30 7.6
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 101 bits (242), Expect = 2e-21
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 193 YAMDVYELNRRVNSSESIVG 252
+A ++YEL+++V+ +E I+G
Sbjct: 152 FAKNMYELHKKVSPNELILG 171
Score = 95.1 bits (226), Expect = 2e-19
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 255 WATGNEVTNHSSVIHEYYSRKCREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMF 434
+ATG+++T HS +IHEYYSR+ P+H+T+DTSL GRM ++AYV +GVP G MF
Sbjct: 173 YATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 232
Query: 435 TPVDVTLTCYEPEIVGLQVCQKT 503
TP+ V Y+ E +G+ + KT
Sbjct: 233 TPLTVKYAYYDTERIGVDLIMKT 255
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 101 bits (242), Expect = 2e-21
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 193 YAMDVYELNRRVNSSESIVG 252
+A ++YEL+++V+ +E I+G
Sbjct: 152 FAKNMYELHKKVSPNELILG 171
Score = 95.1 bits (226), Expect = 2e-19
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 255 WATGNEVTNHSSVIHEYYSRKCREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMF 434
+ATG+++T HS +IHEYYSR+ P+H+T+DTSL GRM ++AYV +GVP G MF
Sbjct: 173 YATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 232
Query: 435 TPVDVTLTCYEPEIVGLQVCQKT 503
TP+ V Y+ E +G+ + KT
Sbjct: 233 TPLTVKYAYYDTERIGVDLIMKT 255
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 101 bits (242), Expect = 2e-21
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 193 YAMDVYELNRRVNSSESIVG 252
+A ++YEL+++V+ +E I+G
Sbjct: 152 FAKNMYELHKKVSPNELILG 171
Score = 95.1 bits (226), Expect = 2e-19
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 255 WATGNEVTNHSSVIHEYYSRKCREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMF 434
+ATG+++T HS +IHEYYSR+ P+H+T+DTSL GRM ++AYV +GVP G MF
Sbjct: 173 YATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 232
Query: 435 TPVDVTLTCYEPEIVGLQVCQKT 503
TP+ V Y+ E +G+ + KT
Sbjct: 233 TPLTVKYAYYDTERIGVDLIMKT 255
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 101 bits (242), Expect = 2e-21
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 193 YAMDVYELNRRVNSSESIVG 252
+A ++YEL+++V+ +E I+G
Sbjct: 152 FAKNMYELHKKVSPNELILG 171
Score = 95.1 bits (226), Expect = 2e-19
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 255 WATGNEVTNHSSVIHEYYSRKCREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMF 434
+ATG+++T HS +IHEYYSR+ P+H+T+DTSL GRM ++AYV +GVP G MF
Sbjct: 173 YATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 232
Query: 435 TPVDVTLTCYEPEIVGLQVCQKT 503
TP+ V Y+ E +G+ + KT
Sbjct: 233 TPLTVKYAYYDTERIGVDLIMKT 255
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 101 bits (242), Expect = 2e-21
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 85 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 144
Query: 193 YAMDVYELNRRVNSSESIVG 252
+A ++YEL+++V+ +E I+G
Sbjct: 145 FAKNMYELHKKVSPNELILG 164
Score = 95.1 bits (226), Expect = 2e-19
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 255 WATGNEVTNHSSVIHEYYSRKCREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMF 434
+ATG+++T HS +IHEYYSR+ P+H+T+DTSL GRM ++AYV +GVP G MF
Sbjct: 166 YATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 225
Query: 435 TPVDVTLTCYEPEIVGLQVCQKT 503
TP+ V Y+ E +G+ + KT
Sbjct: 226 TPLTVKYAYYDTERIGVDLIMKT 248
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 87.4 bits (207), Expect = 4e-17
Identities = 41/80 (51%), Positives = 61/80 (76%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++HPV+L VD+YERRN + RVIGTLLGT +K VEVTNCF V + E +D+V ++
Sbjct: 82 VRLHPVLLASTVDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYNE-SDEVVVDME 140
Query: 193 YAMDVYELNRRVNSSESIVG 252
+A ++YEL+++V+ +E I+G
Sbjct: 141 FAKNMYELHKKVSPNELILG 160
Score = 82.2 bits (194), Expect = 1e-15
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +3
Query: 255 WATGNEVTNHSSVIHEYYSRKCREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMF 434
+A G+++T HS +IHEYYSR+ P+H+T+DTSL G M ++AYV +GVP G+ +F
Sbjct: 162 YAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHMSIKAYVSTLMGVP-GRTVGVF 220
Query: 435 TPVDVTLTCYEPEIVGLQVCQKT 503
TP+ V Y+ E + + + KT
Sbjct: 221 TPLTVKYAYYDTECIRVDLIMKT 243
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE--HADQV- 177
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 178 EAELNYAMDVYELNRRVNSSESIVG 252
+ +Y ++Y + ++VN+ E IVG
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVG 93
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE--HADQV- 177
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 178 EAELNYAMDVYELNRRVNSSESIVG 252
+ +Y ++Y + ++VN+ E IVG
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVG 93
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE--HADQV- 177
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 178 EAELNYAMDVYELNRRVNSSESIVG 252
+ +Y ++Y + ++VN+ E IVG
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVG 93
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 44.4 bits (100), Expect = 3e-04
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+ +I+ Y+ + V G LLG K +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 99 YQMEMMRSLRHVNIDHLHVG 118
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 99 YQMEMMRSLRHVNIDHLHVG 118
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 99 YQMEMMRSLRHVNIDHLHVG 118
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 99 YQMEMMRSLRHVNIDHLHVG 118
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 99 YQMEMMRSLRHVNIDHLHVG 118
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 99 YQMEMMRSLRHVNIDHLHVG 118
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 99 YQMEMMRSLRHVNIDHLHVG 118
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 36.7 bits (81), Expect = 0.066
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 13 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 192
V++ +V+F+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVFK---HYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 95
Query: 193 YAMDVYELNRRVNSSESIVG 252
Y M++ R VN VG
Sbjct: 96 YQMEMMRSLRHVNIDHLHVG 115
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 4 NISVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCF 144
++SV +HP+V+ I D + R + R VIG L+G + +EV N F
Sbjct: 8 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSF 57
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 33.9 bits (74), Expect = 0.47
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 4 NISVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCF 144
++SV +HP+V+ I D + R + R VIG L+G + +EV N F
Sbjct: 38 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSF 87
>AL050051-1|CAB43251.1| 118|Homo sapiens hypothetical protein
protein.
Length = 118
Score = 29.9 bits (64), Expect = 7.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 321 REPVHVTLDTSLAGGRMGLRAYVCVPLG-VPNGKQGCMFTPVDVTLTC 461
R PV V+ L G G+R+ + V L +P G+ GC FT + V L C
Sbjct: 10 RVPVRVSSAPGLGFGGAGMRSLLSVGLPPIPIGR-GCHFTLITVFLYC 56
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 29.9 bits (64), Expect = 7.6
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 374 FTCICLCTIRSAKWKARLHVHSCRC-HSHV 460
+TC+C+CT A +H H C C H+H+
Sbjct: 106 YTCVCVCT------HAYIHTHVCVCVHTHI 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,025,520
Number of Sequences: 237096
Number of extensions: 2090814
Number of successful extensions: 6361
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6352
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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