Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40254
         (688 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ILC9 Cluster: Putative uncharacterized protein; n=1; ...    37   0.40 
UniRef50_Q8J2W5 Cluster: Putative uncharacterized protein; n=2; ...    34   2.8  
UniRef50_Q54VB2 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q4YX32 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    34   3.7  
UniRef50_Q8A8V0 Cluster: Putative uncharacterized protein; n=3; ...    33   6.5  
UniRef50_Q9RII0 Cluster: Putative uncharacterized protein; n=2; ...    33   6.5  

>UniRef50_Q8ILC9 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 5561

 Score = 37.1 bits (82), Expect = 0.40
 Identities = 23/77 (29%), Positives = 38/77 (49%)
 Frame = +1

Query: 229  VTQYDHNMN*SIFRIVIVTVTTNKRTHNYAICIWTIGPVLMTQNTWNTKIKLLLLHGILN 408
            +  Y HN    +F  ++  +   K   N  +CI+ +  +++T        K +L++ ILN
Sbjct: 851  IYNYKHNFYLRVFNFLLNFIKRTKNVINIVLCIFKL--LILT--------KEILVYYILN 900

Query: 409  TFSYYYSSGKMYFMDYN 459
             F YYY   K YF+ YN
Sbjct: 901  LFIYYYIWLKCYFVLYN 917


>UniRef50_Q8J2W5 Cluster: Putative uncharacterized protein; n=2;
           Pyrococcus abyssi|Rep: Putative uncharacterized protein
           - Pyrococcus abyssi
          Length = 795

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +1

Query: 10  PQLTGCYNASSLMLYFLALFTIYVIANMCHLLVILFSLAFMHIL--FRLRLAII*YY*ST 183
           PQ  G      LM Y+L     +       LL++  +LAF HIL  F     ++ Y   T
Sbjct: 189 PQQVGVLIGILLMAYYLGSLDEFTPRRAAVLLILFIALAFSHILSFFLFSTVLVSYTIWT 248

Query: 184 FLSKK 198
           FLSK+
Sbjct: 249 FLSKR 253


>UniRef50_Q54VB2 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 2935

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +1

Query: 340  PVLMTQNTWNTKIKLLLLHGILNTFSYYYS 429
            P L T ++WNT+    L+H I+NTF++ ++
Sbjct: 1320 PYLQTSSSWNTEKFQTLIHNIINTFTFCFN 1349


>UniRef50_Q4YX32 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 1087

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +1

Query: 307 HNYAICIWTIGPVLMTQNTWNTKIKLLLLHGILNTFSYYYSSGKMYF 447
           HN  +C+W I  +L   NT N   ++ + H ++++  +  S GK+++
Sbjct: 225 HNSYLCVWNIKKLLNFINTNNINSEINVTHELISSCGFKISFGKIFY 271


>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
 Frame = +3

Query: 18  YRLLQCFLFNVIFLGAFYHLRYCQHVSF------ISYIVFTRIYAY----TI*IKISYNL 167
           Y+LL  ++FN I +  F++  Y  ++ F      ++YI F     Y     I IK  YN 
Sbjct: 379 YKLLHIYIFNFIIIIIFFYFSYKINIRFNYINFKLNYIYFNNTILYIIDELINIKTKYN- 437

Query: 168 ILLINFFVKEICNL 209
           ILL N F+  I  L
Sbjct: 438 ILLSNLFINFIQKL 451


>UniRef50_Q8A8V0 Cluster: Putative uncharacterized protein; n=3;
           Bacteria|Rep: Putative uncharacterized protein -
           Bacteroides thetaiotaomicron
          Length = 608

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = +1

Query: 226 NVTQYDHNMN*SIFRIVIVTVTTNKRTHNYAICIWTIGPVLMTQNTWNTKIKLLLLHGIL 405
           N+T Y ++ + S+  +   T+T  + T N         P+ + +    T    L++ GI 
Sbjct: 251 NLTNYQYDASCSLPLVSAETITNKQSTEN--------SPIYIYETNTQTYSTYLIIQGIY 302

Query: 406 NTFSYYYSSGKMYFMDYNRNF 468
            T SYYY   KM  +D + N+
Sbjct: 303 ETKSYYY---KMAIVDKDLNY 320


>UniRef50_Q9RII0 Cluster: Putative uncharacterized protein; n=2;
           Streptococcus pyogenes|Rep: Putative uncharacterized
           protein - Streptococcus pyogenes
          Length = 111

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +3

Query: 18  YRLLQ--CFLFNVIFLGAFYHLRYCQHVSFISYIVFTRIYAYTI*IKISYNLILLINFFV 191
           Y+LLQ  CF+  ++FLG  +++   QH   +++ V   I A+ I I   +   L++ +F+
Sbjct: 4   YKLLQAYCFVVAILFLGTSFYIFGSQHTFKLNWFVIL-IIAFCILILKKFLTYLILKYFI 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,941,222
Number of Sequences: 1657284
Number of extensions: 9043404
Number of successful extensions: 18325
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18321
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)