Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40254
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77665-8|CAB01224.2|  135|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z68220-5|CAA92490.2|  282|Caenorhabditis elegans Hypothetical pr...    31   0.58 
Z81131-3|CAB03424.1|  438|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U61956-5|AAB03178.2|  286|Caenorhabditis elegans Serpentine rece...    30   1.3  
Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p...    27   9.5  
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p...    27   9.5  
L14745-13|AAR25658.1|  210|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z77665-8|CAB01224.2|  135|Caenorhabditis elegans Hypothetical
           protein K02E11.7 protein.
          Length = 135

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 295 NKRTHNYAICIWTIGPVLMTQNTWNTKIKLLLLHGILNT-FSYYYSSGKMYFMDYNRNF 468
           NK+T  Y   I T   V+  + T+N   K L++  IL T F  YY+  K +    N  F
Sbjct: 74  NKKTCGYWENIQTKAKVVAGKTTYNKNKKALIIKQILKTDFGMYYTGNKKFEQKVNSLF 132


>Z68220-5|CAA92490.2|  282|Caenorhabditis elegans Hypothetical
           protein T20D3.8 protein.
          Length = 282

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +1

Query: 37  SSLMLYFLALFTIYVIANMCHLLVILFSLAFMHILFRLRLAII 165
           SS +  FL+LF+IY I++    L I F+L  + ILF   L +I
Sbjct: 217 SSTIFCFLSLFSIYCISDFSLELSICFALLHIFILFICPLILI 259


>Z81131-3|CAB03424.1|  438|Caenorhabditis elegans Hypothetical
           protein T24D1.4 protein.
          Length = 438

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 328 WT-IGPVLMTQNTWNTKIKLLLLHGILNTFSYYYSSGKMYFMDYNRNF 468
           WT I P L++     T +K L+L  ++    YYYS    Y +  NR+F
Sbjct: 274 WTQIIPNLLSHLRHLTDMKSLVLQAVVAVLVYYYSYDHPYLLADNRHF 321


>U61956-5|AAB03178.2|  286|Caenorhabditis elegans Serpentine
           receptor, class x protein20 protein.
          Length = 286

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   LCTTTYRLLQCFLF--NVIFLGAFYHLRYCQHVSFISYIVF 119
           +CTT Y LL+C+L+    +++ ++    +C H+++    +F
Sbjct: 134 MCTTFYELLECYLYFHADLWIFSYPETEHCNHLTWYCDFIF 174


>Z83216-7|CAB05676.2|  320|Caenorhabditis elegans Hypothetical
           protein C08F11.9 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 7   VPQLTGC-YNASSLMLYFLALFTIYVIANMCHLLVILFSL 123
           +P L G  Y   SL+    + F +Y+I  + HLL+ L +L
Sbjct: 86  MPMLEGSNYATGSLIFLIGSYFALYIIVQVFHLLIFLLAL 125


>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
           protein F52C9.1a protein.
          Length = 1336

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 570 NYKPTLRCSTTLRNIY 523
           +Y+PTLRC   +RN+Y
Sbjct: 478 SYQPTLRCLVEVRNVY 493


>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
           protein F52C9.1b protein.
          Length = 1331

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 570 NYKPTLRCSTTLRNIY 523
           +Y+PTLRC   +RN+Y
Sbjct: 478 SYQPTLRCLVEVRNVY 493


>L14745-13|AAR25658.1|  210|Caenorhabditis elegans Hypothetical
           protein C02F5.13 protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 369 VPCILCHKDRSYSPYTYCII 310
           +PCI CH  R+++  T CII
Sbjct: 121 LPCIECHGPRTFTKSTPCII 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,278,567
Number of Sequences: 27780
Number of extensions: 237810
Number of successful extensions: 578
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)