Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40252
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071064-1|AAL48686.1|  220|Drosophila melanogaster RE14241p pro...    62   5e-10
AE014297-1726|AAF54971.1|  220|Drosophila melanogaster CG9588-PA...    62   5e-10
AY069359-1|AAL39504.1|  123|Drosophila melanogaster LD06317p pro...    31   1.4  
AE014296-118|AAF47399.1|  123|Drosophila melanogaster CG3402-PA ...    31   1.4  
AY061253-1|AAL28801.1|  334|Drosophila melanogaster LD18835p pro...    29   7.5  
AE014297-3115|AAF55968.1|  334|Drosophila melanogaster CG7080-PA...    29   7.5  
AY118939-1|AAM50799.1| 1541|Drosophila melanogaster LD24778p pro...    28   9.9  
AE014297-3199|AAF56034.2| 1541|Drosophila melanogaster CG5248-PD...    28   9.9  

>AY071064-1|AAL48686.1|  220|Drosophila melanogaster RE14241p
           protein.
          Length = 220

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 27/53 (50%), Positives = 39/53 (73%)
 Frame = +1

Query: 256 LKGSLVDELGYPRDDIDVYEVRHARHKIICLQNDHKKVMQLIERGIAKVYEDL 414
           + G LVD  G+PR+DIDVY+VR AR  IICLQNDHK++M  I+  + + + ++
Sbjct: 40  MSGPLVDAEGFPRNDIDVYQVRLARQTIICLQNDHKELMNQIQTLLNQYHSEI 92



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +3

Query: 516 ISFVDKGSPAEEAGLRAHDELVQFGSVNYQNFK-DVSQIMRIV 641
           ++ V   SPAE AGL A D +++FGS+N  NFK D++QI  +V
Sbjct: 131 VNLVSPDSPAERAGLCAGDAILRFGSINSGNFKGDLAQIGELV 173


>AE014297-1726|AAF54971.1|  220|Drosophila melanogaster CG9588-PA
           protein.
          Length = 220

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 27/53 (50%), Positives = 39/53 (73%)
 Frame = +1

Query: 256 LKGSLVDELGYPRDDIDVYEVRHARHKIICLQNDHKKVMQLIERGIAKVYEDL 414
           + G LVD  G+PR+DIDVY+VR AR  IICLQNDHK++M  I+  + + + ++
Sbjct: 40  MSGPLVDAEGFPRNDIDVYQVRLARQTIICLQNDHKELMNQIQTLLNQYHSEI 92



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +3

Query: 516 ISFVDKGSPAEEAGLRAHDELVQFGSVNYQNFK-DVSQIMRIV 641
           ++ V   SPAE AGL A D +++FGS+N  NFK D++QI  +V
Sbjct: 131 VNLVSPDSPAERAGLCAGDAILRFGSINSGNFKGDLAQIGELV 173


>AY069359-1|AAL39504.1|  123|Drosophila melanogaster LD06317p
           protein.
          Length = 123

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 516 ISFVDKGSPAEEAGLRAHDELVQFGSVNY 602
           ++ V +GSPA  AGLR HD+++Q    ++
Sbjct: 65  VTEVHEGSPAARAGLRIHDKILQCNGYDF 93


>AE014296-118|AAF47399.1|  123|Drosophila melanogaster CG3402-PA
           protein.
          Length = 123

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 516 ISFVDKGSPAEEAGLRAHDELVQFGSVNY 602
           ++ V +GSPA  AGLR HD+++Q    ++
Sbjct: 65  VTEVHEGSPAARAGLRIHDKILQCNGYDF 93


>AY061253-1|AAL28801.1|  334|Drosophila melanogaster LD18835p
           protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 582 GPVHREHEDQPLQPVNLYPQ 523
           GP H +H+ QPLQP    PQ
Sbjct: 129 GPPHLQHQSQPLQPPPQTPQ 148


>AE014297-3115|AAF55968.1|  334|Drosophila melanogaster CG7080-PA
           protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 582 GPVHREHEDQPLQPVNLYPQ 523
           GP H +H+ QPLQP    PQ
Sbjct: 129 GPPHLQHQSQPLQPPPQTPQ 148


>AY118939-1|AAM50799.1| 1541|Drosophila melanogaster LD24778p
           protein.
          Length = 1541

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 516 ISFVDKGSPAEEAGLRAHDELVQFGSVN 599
           +S +   SPAE+AGLR+ D L+    +N
Sbjct: 93  LSCIISSSPAEQAGLRSGDFLISVNGLN 120


>AE014297-3199|AAF56034.2| 1541|Drosophila melanogaster CG5248-PD,
           isoform D protein.
          Length = 1541

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 516 ISFVDKGSPAEEAGLRAHDELVQFGSVN 599
           +S +   SPAE+AGLR+ D L+    +N
Sbjct: 93  LSCIISSSPAEQAGLRSGDFLISVNGLN 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,748,903
Number of Sequences: 53049
Number of extensions: 518573
Number of successful extensions: 1407
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)