Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40252
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-14|AAL16319.1|  197|Caenorhabditis elegans Hypothetical p...    49   3e-06
Z73896-4|CAA98057.2|  503|Caenorhabditis elegans Hypothetical pr...    33   0.14 
U21323-5|AAA62550.1|  124|Caenorhabditis elegans Hypothetical pr...    33   0.14 
AF040661-1|AAK82922.2|  508|Caenorhabditis elegans Hypothetical ...    29   2.2  
AL132876-1|CAB60842.2|  132|Caenorhabditis elegans Hypothetical ...    28   6.8  
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical...    28   6.8  
Z74043-10|CAA98542.2|  653|Caenorhabditis elegans Hypothetical p...    27   9.1  

>U28928-14|AAL16319.1|  197|Caenorhabditis elegans Hypothetical
           protein C44B7.1 protein.
          Length = 197

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 268 LVDELGYPRDDIDVYEVRHARHKIICLQNDHKKVMQLI 381
           L+D  GYP + IDVY VRHARH +ICL+ND   + + I
Sbjct: 39  LLDAEGYPLNTIDVYAVRHARHDLICLRNDRAALTEKI 76



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/48 (35%), Positives = 30/48 (62%)
 Frame = +3

Query: 507 FATISFVDKGSPAEEAGLRAHDELVQFGSVNYQNFKDVSQIMRIVSHS 650
           F  IS V + SPA+  G R  D ++Q+G++++ NF D+ ++ +I   S
Sbjct: 107 FVKISSVVELSPADIGGFRKDDLIIQYGNLHHGNFNDMQEVAQITKQS 154


>Z73896-4|CAA98057.2|  503|Caenorhabditis elegans Hypothetical
           protein F09E8.6 protein.
          Length = 503

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 391 YLSRSVALLSCDHFVGKLSCDARVSLHKRLCHHEGILAHQL 269
           Y+ R+VA   C  +VG+   +  VSL    C  +GI+AH+L
Sbjct: 173 YVKRNVAF-GCSSYVGRAGGNQTVSLEVDKCFSKGIIAHEL 212


>U21323-5|AAA62550.1|  124|Caenorhabditis elegans Hypothetical
           protein C45G9.7 protein.
          Length = 124

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +3

Query: 516 ISFVDKGSPAEEAGLRAHDELVQFGSVNY 602
           I+ V+ GSPA+ AGLR HD+++Q    ++
Sbjct: 63  ITNVESGSPADVAGLRKHDKILQVNGADF 91


>AF040661-1|AAK82922.2|  508|Caenorhabditis elegans Hypothetical
           protein W10G11.19 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +1

Query: 370 MQLIERGIAKVYEDL-IDS-PGIDSEEINSCLNGYPVFKKDET 492
           ++L ++   K+Y +L +DS P  D+ E+   L  + +F+KDET
Sbjct: 93  VELFQKFADKLYTNLALDSLPIFDAGELKKSLKNFEIFEKDET 135


>AL132876-1|CAB60842.2|  132|Caenorhabditis elegans Hypothetical
           protein Y105E8A.1 protein.
          Length = 132

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 268 LVDELGYPRDDIDVYEVRHARHKIICLQNDHKK 366
           ++D LG P D ID+ +  HA  +    +N  KK
Sbjct: 27  ILDGLGIPFDSIDITKPEHAEQRRFMRENASKK 59


>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
           protein Y67A10A.3 protein.
          Length = 1237

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/41 (24%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = +1

Query: 376 LIERGIAKVYE--DLIDSPGIDSEEINSCLNGYPVFKKDET 492
           ++ R +++VYE  +++ +    ++++N+ ++G PV+K   T
Sbjct: 590 IVLRKMSEVYEKSEIVSAAASSADDVNNLISGVPVYKSSWT 630


>Z74043-10|CAA98542.2|  653|Caenorhabditis elegans Hypothetical
           protein T19B10.3 protein.
          Length = 653

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 343 CLQNDHKKVMQLIERGIAKVYEDLIDSPGIDSE 441
           CL+N+  ++  L+E    K +E + D  GI S+
Sbjct: 485 CLENEENRLFMLVENQGRKTFETINDRKGILSD 517


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,199,847
Number of Sequences: 27780
Number of extensions: 285272
Number of successful extensions: 766
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)