Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40251
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3LVY2 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_Q3LWH3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_Q8ID75 Cluster: Putative uncharacterized protein PF13_0...    33   5.7  
UniRef50_Q240J8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  

>UniRef50_Q3LVY2 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 351

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 14/58 (24%), Positives = 30/58 (51%)
 Frame = -1

Query: 442 ISKWRSLTAAHRKSRKYTIIALKLMNFMENYIHL*YIFVFLTTFINYILQTFNLHYIH 269
           + K+R L       + Y +  L  +N   ++I+  ++F+FL  + N +  TF  H+++
Sbjct: 124 VMKYRKLLEIFHIFKVYQLSNLTKLNSKRDFINRIFLFLFLLEYKNVLFSTFTTHFVY 181


>UniRef50_Q3LWH3 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 134

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 19/94 (20%), Positives = 43/94 (45%)
 Frame = -1

Query: 475 YHFLSFFFNKIISKWRSLTAAHRKSRKYTIIALKLMNFMENYIHL*YIFVFLTTFINYIL 296
           Y+FL+F F  ++  +   +   +  + Y    L    +    I   +IF++     N +L
Sbjct: 24  YNFLNFLFTSVLKYFGFFSCPKKNKKTYFNNNLNSFPYTLFSISFIFIFIYFINCTNALL 83

Query: 295 QTFNLHYIHQLCILHV*LQRSKYIFILQILYHMS 194
            +FN+    ++ I++  +     +  L +LY++S
Sbjct: 84  CSFNMDSFDRILIINSLMISYLELISLYLLYNLS 117


>UniRef50_Q8ID75 Cluster: Putative uncharacterized protein
           PF13_0333; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0333 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1024

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
 Frame = -1

Query: 361 MENYIHL*YIFVFLTTFINYILQTFNLHYIHQLCILHV*LQRSKYIFILQILYHMST*I- 185
           M+NY H  Y F  L    NY++  +   Y H +C  H+   R   +     L  +S  + 
Sbjct: 510 MDNYDHQSYNFPTLYDIKNYVVTLYKELYTH-ICYPHI--FRKIIVSCNNSLLLLSNNLN 566

Query: 184 KVKMSYDVNL*ISFVTFRFIIESVSKSF-----FFIITRKS*RFLFM 59
            +K + ++N+ I   T    I    KSF      F+I+RK  R+LF+
Sbjct: 567 NLKQNINLNIDIDMNTKYININYAHKSFQYNLELFLISRKLLRYLFI 613


>UniRef50_Q240J8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 590

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 484 INQYHFLSFFFNKIISKWRSLTAAHRKSRKYTIIALKLMNFMENYIHL--*YIFVFLTTF 311
           IN     S    KII+K +    A    RKY++IA ++   M  Y HL    + + L  F
Sbjct: 395 INGKEMYSVNVEKIINKMKIRHIAQIVERKYSLIAGRIFRIMRKYKHLEEKAVKLILKIF 454

Query: 310 INYILQTFNLHYIHQLCI 257
           +N  L  F ++ I ++ +
Sbjct: 455 VN-TLNVFEINKISEIAL 471


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,025,958
Number of Sequences: 1657284
Number of extensions: 9777823
Number of successful extensions: 20913
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20896
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)