Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40251
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81533-3|CAB04335.1|  327|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical p...    29   3.6  
Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U59211-1|AAB09670.1|  420|Caenorhabditis elegans embryonic membr...    28   4.8  
U53343-3|AAA96220.2|  420|Caenorhabditis elegans Innexin protein...    28   4.8  
AC006680-8|AAK72298.1|  355|Caenorhabditis elegans Serpentine re...    28   4.8  
U39652-5|AAV28338.1|  986|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z81533-3|CAB04335.1|  327|Caenorhabditis elegans Hypothetical
           protein F36G9.5 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 553 FRI*KQI*NPFSGRDVNDSLFSIINQYHFLSFFF 452
           FRI K+    +  R+VN  LF +I   H++SF F
Sbjct: 50  FRIFKKFLAEYFDRNVNVQLFGVITLSHYMSFLF 83


>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical protein
            C01G12.8 protein.
          Length = 1049

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = -1

Query: 463  SFFFNKIISKWRSLTAAHRKSRKYTIIALKLMNFMEN----YIHL*YIFVFLTTFINYIL 296
            +FFF  ++++W  L A+  K+RK +++   + N + N    +     IFV  T F+N +L
Sbjct: 947  TFFFTIVVTQWSDLFAS--KTRKNSLVMQGMENHVLNTSVIFTCFLAIFVLNTPFVNEVL 1004


>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
            protein C01G12.8 protein.
          Length = 1049

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = -1

Query: 463  SFFFNKIISKWRSLTAAHRKSRKYTIIALKLMNFMEN----YIHL*YIFVFLTTFINYIL 296
            +FFF  ++++W  L A+  K+RK +++   + N + N    +     IFV  T F+N +L
Sbjct: 947  TFFFTIVVTQWSDLFAS--KTRKNSLVMQGMENHVLNTSVIFTCFLAIFVLNTPFVNEVL 1004


>Z83116-3|CAB05561.1|  284|Caenorhabditis elegans Hypothetical
           protein M01B2.3 protein.
          Length = 284

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = -1

Query: 505 NDSLFSIINQYHFLSFFFNKIISKWRSLTAAHRKSRKYTIIALKLMNFMENYIHL*YIFV 326
           N+ +   +N    L+ FF   + K+ S T  + +  + T IA  L++F        +I +
Sbjct: 175 NERVVCFMNGVFSLTLFFRFFVWKYVSKTQTNERISRATRIA--LLDF--------FIMI 224

Query: 325 FLTTFINYILQTFNLHYIHQLCIL 254
           F     +YI   FNL  +  L I+
Sbjct: 225 FFNILASYITTIFNLQNVGPLTIV 248


>U21323-12|AAA62554.2|  354|Caenorhabditis elegans Hypothetical
           protein C45G9.11 protein.
          Length = 354

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 382 ALKLMNFMENYIHL*YIFVFLTTFINYILQTFNL 281
           A  L+NF +  +H+ YIF   + FIN+    F++
Sbjct: 266 ARALVNFDKAVLHIHYIFCIFSFFINFFFLIFSI 299


>Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical
           protein F49H6.11 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 363 KFINLSAIIVYLRDFLCAAVKLRHFEIIL 449
           K++    +   L+DF+C+A+ + HFE +L
Sbjct: 149 KYVRNFNVFFVLKDFVCSAILVLHFEKLL 177


>U59211-1|AAB09670.1|  420|Caenorhabditis elegans embryonic membrane
           protein protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = -1

Query: 430 RSLTAAHRKSRKYTIIALKLMNFMENYIHL*----YIFVFLTTFINYILQTFNLHY 275
           R L   HR    YT+  + ++N     I+L     ++FV +TTFIN +   + L +
Sbjct: 255 RKLANVHR----YTVQCVLMINMFNEKIYLFIWFWFVFVLITTFINTLCTIYRLSF 306


>U53343-3|AAA96220.2|  420|Caenorhabditis elegans Innexin protein 3
           protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = -1

Query: 430 RSLTAAHRKSRKYTIIALKLMNFMENYIHL*----YIFVFLTTFINYILQTFNLHY 275
           R L   HR    YT+  + ++N     I+L     ++FV +TTFIN +   + L +
Sbjct: 255 RKLANVHR----YTVQCVLMINMFNEKIYLFIWFWFVFVLITTFINTLCTIYRLSF 306


>AC006680-8|AAK72298.1|  355|Caenorhabditis elegans Serpentine
           receptor, class t protein6 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 306 TIYYKLSTYTIFINCVFCTFDCSVPNIYLFYKFC 205
           T  YK     IF   + C F  +V  +Y F  FC
Sbjct: 232 TWLYKTKRQIIFQAVILCVFHATVAGLYSFMMFC 265


>U39652-5|AAV28338.1|  986|Caenorhabditis elegans Hypothetical
           protein R07E4.1b protein.
          Length = 986

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  RVIIKKNDFDTDSIINLNVTKLIQRFTS*DILTFIYVDMWYKICKINIYLERCNQ 248
           RV+I KN FD  S +N N      +++  DI   +  D   +I  + I+L    Q
Sbjct: 110 RVVIDKNQFDVTSAVNGNYELYPTKWSLLDIAINLNNDHDKRISSLQIHLSLLKQ 164


>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
           protein R07E4.1a protein.
          Length = 1122

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  RVIIKKNDFDTDSIINLNVTKLIQRFTS*DILTFIYVDMWYKICKINIYLERCNQ 248
           RV+I KN FD  S +N N      +++  DI   +  D   +I  + I+L    Q
Sbjct: 246 RVVIDKNQFDVTSAVNGNYELYPTKWSLLDIAINLNNDHDKRISSLQIHLSLLKQ 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,001,968
Number of Sequences: 27780
Number of extensions: 250932
Number of successful extensions: 524
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)