Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40247
(598 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 25 0.48
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 25 0.48
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 25 0.48
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 0.85
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 1.5
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 23 1.5
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 23 2.6
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 23 2.6
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 7.9
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 7.9
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 7.9
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 25.0 bits (52), Expect = 0.48
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 538 RLCNIYLIYMFYMYNIKCLQKVVIAFSI 455
R C++ L+++ Y +NI +K++ A I
Sbjct: 75 RYCSVLLVFLTYFFNILFRKKLLNAVKI 102
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 25.0 bits (52), Expect = 0.48
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 122 WVQIYLLEHNQIRTENQIFYF 184
++ + LEHN IR +N + YF
Sbjct: 131 FINLPFLEHNLIRLKNCVIYF 151
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 25.0 bits (52), Expect = 0.48
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 538 RLCNIYLIYMFYMYNIKCLQKVVIAFSI 455
R C++ L+++ Y +NI +K++ A I
Sbjct: 71 RYCSVLLVFLTYFFNILFRKKLLNAVKI 98
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 24.2 bits (50), Expect = 0.85
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -3
Query: 329 CFF*VFETFDIIIFHFVITICLFVFY 252
C + + F + H ++ +C++ FY
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYYFY 262
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -3
Query: 305 FDIIIFHFVITICLFVFY 252
F I H + +C++ FY
Sbjct: 272 FIIFTMHLLFLLCIYYFY 289
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.5
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +2
Query: 113 KHHWVQIYLLEHNQIRTENQIFYFTLNHQNQWG 211
++ W +++L+EH ++T + N+ G
Sbjct: 155 RYSWAKVFLVEHILVQTNKLVLALECNNTTAEG 187
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 23.4 bits (48), Expect = 1.5
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +2
Query: 113 KHHWVQIYLLEHNQIRTENQIFYFTLNHQNQWG 211
++ W +++L+EH ++T + N+ G
Sbjct: 155 RYSWAKVFLVEHILVQTNKLVLALECNNTTAEG 187
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -1
Query: 529 NIYLIYMFYMYNIKCLQKVVIAFSIKIYNQQGIS 428
N+Y++ + +QK+ AFS+++ G+S
Sbjct: 229 NLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVS 262
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -1
Query: 529 NIYLIYMFYMYNIKCLQKVVIAFSIKIYNQQGIS 428
N+Y++ + +QK+ AFS+++ G+S
Sbjct: 229 NLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVS 262
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 528 IFILSTCFICIT 493
+F+LST ICIT
Sbjct: 238 LFVLSTFSICIT 249
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 371 FEVRFPVFLEQHRRIM 418
F PVFL++HR M
Sbjct: 469 FSGELPVFLQEHRNGM 484
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 371 FEVRFPVFLEQHRRIM 418
F PVFL++HR M
Sbjct: 469 FSGELPVFLQEHRNGM 484
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,053
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -