Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40247
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069118-1|AAL39263.1|  370|Drosophila melanogaster GH13089p pro...    42   5e-04
AE014134-3344|AAF53965.1|  370|Drosophila melanogaster CG1071-PA...    42   5e-04
AB016824-1|BAA33742.1|  370|Drosophila melanogaster E2F-like tra...    42   5e-04
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    29   4.8  
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    29   4.8  
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    29   4.8  

>AY069118-1|AAL39263.1|  370|Drosophila melanogaster GH13089p
           protein.
          Length = 370

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +3

Query: 321 EEASLINDCLLRLSPPASKYDFLFSLSNTEGLCELFDIPC 440
           ++ +L N  LL+L+PP    DF F+L + EG+CELFD+ C
Sbjct: 332 DDPNLENPPLLQLNPPQE--DFNFALKSDEGICELFDVQC 369


>AE014134-3344|AAF53965.1|  370|Drosophila melanogaster CG1071-PA
           protein.
          Length = 370

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +3

Query: 321 EEASLINDCLLRLSPPASKYDFLFSLSNTEGLCELFDIPC 440
           ++ +L N  LL+L+PP    DF F+L + EG+CELFD+ C
Sbjct: 332 DDPNLENPPLLQLNPPQE--DFNFALKSDEGICELFDVQC 369


>AB016824-1|BAA33742.1|  370|Drosophila melanogaster E2F-like
           transcription factor(E2F2) protein.
          Length = 370

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +3

Query: 321 EEASLINDCLLRLSPPASKYDFLFSLSNTEGLCELFDIPC 440
           ++ +L N  LL+L+PP    DF F+L + EG+CELFD+ C
Sbjct: 332 DDPNLENPPLLQLNPPQE--DFNFALKSDEGICELFDVQC 369


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p protein.
          Length = 1188

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 125  PNGASKTKTRSF*KHCWISVSMTKHISWL 39
            PNG  + + R F + CW  V   K   WL
Sbjct: 1006 PNGKRRKRRRRFKRRCWTHVKNKKKKQWL 1034


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
            isoform B protein.
          Length = 1188

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 125  PNGASKTKTRSF*KHCWISVSMTKHISWL 39
            PNG  + + R F + CW  V   K   WL
Sbjct: 1006 PNGKRRKRRRRFKRRCWTHVKNKKKKQWL 1034


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
            isoform A protein.
          Length = 1188

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 125  PNGASKTKTRSF*KHCWISVSMTKHISWL 39
            PNG  + + R F + CW  V   K   WL
Sbjct: 1006 PNGKRRKRRRRFKRRCWTHVKNKKKKQWL 1034


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,034,884
Number of Sequences: 53049
Number of extensions: 413107
Number of successful extensions: 1017
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)