Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40245
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   141   5e-36
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   141   5e-36
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   134   9e-34
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  141 bits (342), Expect = 5e-36
 Identities = 78/134 (58%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
 Frame = +3

Query: 300 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 479
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 480 FDNRMVNHFVRSSRGNTKR-TSLPTRELLGVCVLHVRGQRGLVIVHTSEH*DRFSL*GID 656
           FDNR+V +  +  +   K   S   R L  +     R +R L     +         GID
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGID 120

Query: 657 FYTSITRARFEELN 698
           + T+ITRARFE++N
Sbjct: 121 YSTTITRARFEDIN 134


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  141 bits (342), Expect = 5e-36
 Identities = 78/134 (58%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
 Frame = +3

Query: 300 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 479
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 480 FDNRMVNHFVRSSRGNTKR-TSLPTRELLGVCVLHVRGQRGLVIVHTSEH*DRFSL*GID 656
           FDNR+V +  +  +   K   S   R L  +     R +R L     +         GID
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGID 120

Query: 657 FYTSITRARFEELN 698
           + T+ITRARFE++N
Sbjct: 121 YSTTITRARFEDIN 134


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  134 bits (323), Expect = 9e-34
 Identities = 69/134 (51%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
 Frame = +3

Query: 300 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 479
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 480 FDNRMVNHFVRSSRGNTKRTSLPTRELLGVCVLHV-RGQRGLVIVHTSEH*DRFSL*GID 656
           FD +++++F++  +   K+     ++ L      V + +R L  VH +       L   D
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYD 119

Query: 657 FYTSITRARFEELN 698
           F  ++TRA+FEELN
Sbjct: 120 FSETLTRAKFEELN 133


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 73  DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 198
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 255 TKDAGTISGLNVLRIINEPTAA 320
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/61 (18%), Positives = 24/61 (39%)
 Frame = -1

Query: 506 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 327
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 326 N 324
           +
Sbjct: 270 S 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,515
Number of Sequences: 336
Number of extensions: 3670
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)