Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40245
(731 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 180 1e-46
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 175 4e-45
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 166 2e-42
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 149 5e-37
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 128 8e-31
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 66 6e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 52 6e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.22
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.90
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 4.8
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 26 6.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.4
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 8.4
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 8.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 180 bits (439), Expect = 1e-46
Identities = 96/153 (62%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEE 212
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRS-SRGNTKRTSLPTRELLGVCVLHVRGQRGL 602
GIFEVK+TAGDTHLGGEDFD+R+VNHF++ R N K + R + + R +R L
Sbjct: 213 GIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTL 272
Query: 603 VIVHTSEH*DRFSL*GIDFYTSITRARFEELNA 701
+ GIDFYTSITRARFEEL A
Sbjct: 273 SSSAQASIEIDSLFEGIDFYTSITRARFEELCA 305
Score = 140 bits (338), Expect = 2e-34
Identities = 64/87 (73%), Positives = 74/87 (85%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL KM+ETAE
Sbjct: 71 LIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAE 130
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
AYLG V +AV+TVPAYFNDSQRQA K
Sbjct: 131 AYLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 175 bits (427), Expect = 4e-45
Identities = 95/153 (62%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEE 212
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRS-SRGNTKRTSLPTRELLGVCVLHVRGQRGL 602
GIFEVK+TAGDTHLGGEDFD+R+VNHF + R N K + R + + R +R L
Sbjct: 213 GIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTL 272
Query: 603 VIVHTSEH*DRFSL*GIDFYTSITRARFEELNA 701
+ GIDFYTSITRARFEEL A
Sbjct: 273 SSSAQASIEIDSLYEGIDFYTSITRARFEELCA 305
Score = 132 bits (319), Expect = 5e-32
Identities = 60/87 (68%), Positives = 72/87 (82%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL KM+E+AE
Sbjct: 71 LIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAE 130
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
A+LG V +AV+TVPAYFNDSQRQA K
Sbjct: 131 AFLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 166 bits (404), Expect = 2e-42
Identities = 90/154 (58%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+
Sbjct: 157 RAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQG 216
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRSSRGNTK-RTSLPTRELLGVCVLHVRGQRGL 602
G+FEV +TAGDTHLGGEDFDN +V HF++ + K S R L + R +R L
Sbjct: 217 GVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRAL 276
Query: 603 -VIVHTSEH*DRFSL*GIDFYTSITRARFEELNA 701
+ T+ D S GIDF +SITRARFE++NA
Sbjct: 277 SSVTQTTVEVDSLSN-GIDFSSSITRARFEDINA 309
Score = 114 bits (275), Expect = 1e-26
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLTKMKE +E
Sbjct: 75 LIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISE 134
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
A L K V+ AVITVPAYF+DSQR A K
Sbjct: 135 AKLNKRVEKAVITVPAYFSDSQRAATK 161
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 149 bits (360), Expect = 5e-37
Identities = 78/154 (50%), Positives = 111/154 (72%), Gaps = 3/154 (1%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I++
Sbjct: 186 RQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDN 244
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRSSRGNTKRTSLPTREL--LGVCVLHVRGQRG 599
G+FEV +T+GDTHLGGEDFDNR++N+ R+ N K T++L +G V +
Sbjct: 245 GVFEVLATSGDTHLGGEDFDNRVINYLARTY--NRKNNVDVTKDLKAMGKLKREVEKAKR 302
Query: 600 LVIVHTSEH*DRFS-L*GIDFYTSITRARFEELN 698
+ S + S G DF +++RA+FEE+N
Sbjct: 303 TLSSQKSVRIEIESFFNGQDFSETLSRAKFEEIN 336
Score = 115 bits (276), Expect = 8e-27
Identities = 51/87 (58%), Positives = 70/87 (80%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+KMK+TAE
Sbjct: 104 LIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAE 163
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
AYLGK V +AV+TVPAYFND+QRQA K
Sbjct: 164 AYLGKPVTHAVVTVPAYFNDAQRQATK 190
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 128 bits (309), Expect = 8e-31
Identities = 59/94 (62%), Positives = 75/94 (79%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +
Sbjct: 199 RQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKN--DAIVAVFDLGGGTFDISILELNN 256
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRSSRGN 527
G+FEV+ST GDTHLGGEDFD +V H V + + N
Sbjct: 257 GVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKN 290
Score = 89.4 bits (212), Expect = 5e-19
Identities = 42/87 (48%), Positives = 58/87 (66%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGR+F++ VQ D+K P+++V + KT+ P ++ +L+KM+ETA
Sbjct: 120 LIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGFILSKMRETAS 176
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
YLGK V+NAV+TVPAYFNDSQRQA K
Sbjct: 177 TYLGKDVKNAVVTVPAYFNDSQRQATK 203
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 503 LCQEFKRKYKKDLATNKRALRRLRTACERAK 595
+ + FK+ DL+ ++ A++R+R A E+AK
Sbjct: 283 IVETFKKNEGLDLSKDRLAVQRIREAAEKAK 313
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Frame = +3
Query: 240 LSKTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVS 407
+ + + +A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VS
Sbjct: 155 IQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVS 214
Query: 408 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 506
I+ G F +KST D +LG + D ++++F
Sbjct: 215 IVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYF 247
Score = 44.8 bits (101), Expect = 1e-05
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 LIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 177
L GR ++D ++ + ++ G KV Y E+ F ++ + TK+K A
Sbjct: 74 LAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKAIA 133
Query: 178 EAYLGKTVQNAVITVPAYFNDSQRQA 255
EA L +V + VI++PA+F D QR+A
Sbjct: 134 EAELIGSVSDVVISIPAWFTDIQRRA 159
Score = 34.7 bits (76), Expect = 0.014
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 512 EFKRKYKKDLATNKRALRRLRTACERAKR 598
EFK KYK D+ +N +A RL TA ER K+
Sbjct: 250 EFKEKYKIDVLSNPKATFRLATAVERLKK 278
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 52.4 bits (120), Expect = 6e-08
Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ + + A +GL VL++I++P A +A ++ ++ V++ + G +VS+++++
Sbjct: 179 RKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKG 238
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRS-SRGNTKRTSLPTRELLGVCVLHVRGQRGL 602
G+ + ++ D +LGGE + +VN F + + N R L + +R L
Sbjct: 239 GLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVL 298
Query: 603 VIVHTSEH*DRFSL*GIDFYTSITRARFE 689
T+ GIDF++SI R R++
Sbjct: 299 SNGTTASAAVDSLADGIDFHSSINRLRYD 327
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +1
Query: 112 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQA 255
++K E S L ++ E+AE +LG V V++VP YF D+QR+A
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKA 181
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 509 QEFKRKYKKDLATNKRALRRLRTACERAKR 598
+EF++K D N R+L +LR CE KR
Sbjct: 267 KEFEKKNGIDPRKNARSLAKLRAQCEITKR 296
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.7 bits (66), Expect = 0.22
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 112 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQR 249
+++ + EE+ +M + AE + + + V+TVP +FN+ QR
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQR 176
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.90
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 484 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 374
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 484 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 338
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.6
Identities = 28/126 (22%), Positives = 53/126 (42%)
Frame = -1
Query: 392 TAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCACL*ESLKYAGTVI 213
+++ + + S SS L T S S+S I S + F + S + I
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618
Query: 212 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSAC 33
++ T+L + S + +S+ + S +LSS + + + SL+T S+
Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLSTYSSSVIPSSS 675
Query: 32 TVASSN 15
T+ SS+
Sbjct: 676 TLVSSS 681
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +3
Query: 336 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 506
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 528 TKRTSLPTRELLGVCVLHVR-GQRGLVIVHTS 620
T R PT +G C LHV GQ G V + +
Sbjct: 259 TYRNLYPTVGAIGPCTLHVNLGQAGYVFIEAN 290
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 6.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -2
Query: 610 TMTSPLCPLTCSTQTPKSSL--VGSEVLFVFPLELLTKWLTMRLSKSSPPKWVSPAVDFT 437
T +SPL P T ++ T +S+ G+ V P T T S PP S +
Sbjct: 273 TNSSPL-PTTSTSCTTSTSIPPTGNSTTPVTPTVPPTS--TSSTSTPPPPASTSSTGTSS 329
Query: 436 SKIPSSMVRMDTSKVPPPRSKISTFRSP 353
S +PS+ TS PP +T +P
Sbjct: 330 SPLPSTSTSCTTSTSIPPTGNSTTPVTP 357
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 8.4
Identities = 18/72 (25%), Positives = 29/72 (40%)
Frame = -2
Query: 472 PPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLMIR 293
PP S K P V VP P S S R P+L I+ + G+L+++
Sbjct: 416 PPSIASSPESKRRKCPKKFVARPP--VPHPTSLYSQIRIGCPYLKPKLVISKSFGTLIVK 473
Query: 292 RTFKPEMVPASF 257
+ ++ +F
Sbjct: 474 NHNQLSLLKCTF 485
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 388 AVPSTCPSLPSRMVSSR*NPPPATPTW 468
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,052,373
Number of Sequences: 5004
Number of extensions: 63627
Number of successful extensions: 249
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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