Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40245
(731 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 190 1e-48
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 9e-47
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 177 1e-44
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 154 8e-38
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 97 1e-20
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 70 2e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.2
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 29 2.9
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.9
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_49281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_14991| Best HMM Match : PI3_PI4_kinase (HMM E-Value=1.9) 28 6.8
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 28 9.0
SB_55963| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.0
SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 9.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 190 bits (462), Expect = 1e-48
Identities = 99/152 (65%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIED
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIED 214
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRSSRGNTKRTSLPTRELLGVCVLHVRGQRGLV 605
GIFEVKSTAGDTHLGGEDFDN+MV+HFV+ + K+ P + + + +
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTL 274
Query: 606 IVHTSEH*DRFSL-*GIDFYTSITRARFEELN 698
T + SL GIDFYTSITRARFEELN
Sbjct: 275 SSSTQASIEIDSLFEGIDFYTSITRARFEELN 306
Score = 137 bits (332), Expect = 7e-33
Identities = 62/87 (71%), Positives = 73/87 (83%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAE
Sbjct: 73 LIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAE 132
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
AYLG V +AV+TVPAYF+DSQRQA K
Sbjct: 133 AYLGAKVTDAVVTVPAYFHDSQRQATK 159
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 184 bits (447), Expect = 9e-47
Identities = 98/153 (64%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IED
Sbjct: 248 RQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIED 307
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVRSSRGNTKRTSLPTRELLGVCVLHVRGQRGLV 605
GIFEVKST GDTHLGGEDFDN MV+ FV+ + K+ P + L + +
Sbjct: 308 GIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTL 367
Query: 606 IVHTSEH*DRFSL-*GIDFYTSITRARFEELNA 701
T + SL GIDFYTSITRARFEE+NA
Sbjct: 368 SSSTQASIEIDSLYDGIDFYTSITRARFEEMNA 400
Score = 116 bits (279), Expect = 2e-26
Identities = 65/112 (58%), Positives = 74/112 (66%), Gaps = 25/112 (22%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV------------- 141
LIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 73 LIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEY 132
Query: 142 ------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 261
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQA K
Sbjct: 133 KGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +1
Query: 136 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 261
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQA K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 252
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 177 bits (430), Expect = 1e-44
Identities = 95/152 (62%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+D
Sbjct: 155 RQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDD 214
Query: 426 G-IFEVKSTAGDTHLGGEDFDNRMVNHFVRS-SRGNTKRTSLPTRELLGVCVLHVRGQRG 599
G +FEVKSTAGDTHLGGEDFDNR+VNHFV R K S +R + + R +R
Sbjct: 215 GSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRT 274
Query: 600 LVIVHTSEH*DRFSL*GIDFYTSITRARFEEL 695
L + GIDFYT I+RARFE+L
Sbjct: 275 LSSSTEASIEVDSLFEGIDFYTKISRARFEDL 306
Score = 140 bits (339), Expect = 1e-33
Identities = 65/87 (74%), Positives = 76/87 (87%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAE
Sbjct: 73 LIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAE 132
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
AYLG+ V +AVITVPAYFNDSQRQA K
Sbjct: 133 AYLGQKVTSAVITVPAYFNDSQRQATK 159
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 154 bits (373), Expect = 8e-38
Identities = 80/153 (52%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +TKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++
Sbjct: 853 RQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDN 911
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVR-SSRGNTKRTSLPTRELLGVCVLHVRGQRGL 602
G+FEV +T GDTHLGGEDFD ++ HF++ + K R + + + +R L
Sbjct: 912 GVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRAL 971
Query: 603 VIVHTSEH*DRFSL*GIDFYTSITRARFEELNA 701
H + G DF +TRARFEELNA
Sbjct: 972 STQHQARVEIESFFEGEDFSEMLTRARFEELNA 1004
Score = 118 bits (283), Expect = 6e-27
Identities = 56/87 (64%), Positives = 69/87 (79%)
Frame = +1
Query: 1 LIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
LIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLTKMKETAE
Sbjct: 771 LIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAE 830
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQK 261
AYLGK V +AV+TVPAYFND+QRQA K
Sbjct: 831 AYLGKKVTHAVVTVPAYFNDAQRQATK 857
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/89 (49%), Positives = 65/89 (73%)
Frame = +3
Query: 246 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 425
+ +T A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 185 RNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQG 243
Query: 426 GIFEVKSTAGDTHLGGEDFDNRMVNHFVR 512
G+F + AG+ LGG+DF+ R + + ++
Sbjct: 244 GMFVTMAMAGNNRLGGQDFNARFMQYLLQ 272
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 4 IGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
IG+ F + K + F V +D G V KG PEE+ V+ K++ AE
Sbjct: 103 IGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAE 162
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQAQKMQVPSLA 282
L TV AV++VPA F+ QR A ++ SLA
Sbjct: 163 RNLTTTVTKAVMSVPAEFDIKQRNA-TVKAASLA 195
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 73.7 bits (173), Expect = 1e-13
Identities = 29/48 (60%), Positives = 40/48 (83%)
Frame = +3
Query: 366 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 509
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ +
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLI 49
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 503 LCQEFKRKYKKDLATNKRALRRLRTACERAK 595
L EFK++ DL+ + AL+RLR A E+AK
Sbjct: 48 LIAEFKKESGVDLSKDSMALQRLREAAEKAK 78
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 IGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 180
IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+ T++K TAE
Sbjct: 130 IGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAE 189
Query: 181 AYLGKTVQNAVITVPAYFNDSQRQ 252
L V + VI+VP+Y+ D QR+
Sbjct: 190 IALKTKVTDCVISVPSYYTDRQRR 213
Score = 68.5 bits (160), Expect = 5e-12
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Frame = +3
Query: 261 DAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE---RNVLIFDLGGGTFDVSILTIEDGI 431
DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V I G
Sbjct: 217 DASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQ 276
Query: 432 FEVKSTAGDTHLGGEDFDNRMVNHFVRSSRGNTK---RTSLPTRELLGVCVLHVRGQRGL 602
+V STA + +LGG DFD +V HF + + K +S+ + LG + L
Sbjct: 277 LKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGA---ECEKLKKL 333
Query: 603 VIVHTSEH*DRFS--L*GIDFYTSITRARFEELNA 701
+ +TSE + D + + RA+FEEL A
Sbjct: 334 MSANTSEIPINIECFMEDKDVHGRMKRAQFEELAA 368
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/57 (56%), Positives = 45/57 (78%)
Frame = +1
Query: 91 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 261
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQA K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/28 (82%), Positives = 23/28 (82%), Gaps = 2/28 (7%)
Frame = +3
Query: 288 VLRIINEPTAAAIAYGLDKK--GTGERN 365
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 92 VLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +1
Query: 85 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQA 255
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRA 123
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 16/106 (15%)
Frame = +3
Query: 264 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------ 413
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTK 186
Query: 414 TIEDGIFE------VKSTAGDTHLGGEDFDNRMVNHFVRSSRGNTK 533
T + GI E +K D LGG D R+ +H V+ + N K
Sbjct: 187 TKDRGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/48 (35%), Positives = 34/48 (70%)
Frame = +3
Query: 357 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 500
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLD 200
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 315 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 482
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 363 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 482
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +3
Query: 303 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 482
N P A + GT E +I DLG G + + + E G V +TH+ G F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065
Query: 483 DNRM 494
R+
Sbjct: 3066 KIRV 3069
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 366 VLIFDLGGGTFDVSILTIEDGIFEVK 443
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 372 IFDLGGGTFDVSILTIEDGIFEV 440
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -2
Query: 502 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 332
+L +L P KW P D +S P V + + PP S + PF+S+P
Sbjct: 351 YLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGSAKPATQPFVSQP 406
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 463 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 347
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 449 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 282
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 281 ---ARDGTC 264
AR TC
Sbjct: 345 VYNARISTC 353
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -2
Query: 508 TKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 329
+ W+ KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 328 AIAAAVGSLMIRRTF 284
A+ A+ SL++ F
Sbjct: 1302 AVNVAISSLVLPSLF 1316
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 379 TSAAVPSTCPSLPSRMVSSR*NPPPATP 462
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_49281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 28.3 bits (60), Expect = 6.8
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = -2
Query: 484 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGS 305
S +S P V P T IP ++ DT+ PP S S F++ S AV S
Sbjct: 704 SPTSAPTLVVPPTSTT--IP--LLTADTTTSKPPSSSTSIFQAAPATTSNTTTQIPAVAS 759
Query: 304 LMIRRTFKPEMVPASFV 254
+ T KP ++PA+ V
Sbjct: 760 -KLPDTTKPPILPANLV 775
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 179 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 6
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_14991| Best HMM Match : PI3_PI4_kinase (HMM E-Value=1.9)
Length = 235
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 209 QLSRFPRTSMTLKDKHKRCRYHLWLERSP 295
++ R PR TLKD+ K RY + ERSP
Sbjct: 84 RIRRIPRDD-TLKDRRKGSRYDAFEERSP 111
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 502 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 332
+ +L P KW D T I +V PPPR + + +PF+S+P
Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613
>SB_55963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 644 KRESISMLACVDDDKSSLPSHMQY 573
K SIS+ C DD K +LPS + Y
Sbjct: 7 KESSISIKLCYDDFKCTLPSSVSY 30
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 374 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 288
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 869
Score = 27.9 bits (59), Expect = 9.0
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -2
Query: 724 NGRPETDPAFSSSKRARVIDV*KSIPQRENLSQCSLVWTMTSPLCPLTCSTQTPKSSLVG 545
N PE P F+S +A D+ + E L L + SPLCP T S++ +
Sbjct: 610 NENPEARPTFTSLVQA-FDDLVALLSDEEYLE---LQGPLLSPLCPRTASSELAPFARDN 665
Query: 544 SEVLFVFPLELLTK---WLTMRLSKSS 473
+ F E LTK L++R SK+S
Sbjct: 666 ASSEFTSSSENLTKSENSLSVRDSKTS 692
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,450,648
Number of Sequences: 59808
Number of extensions: 498906
Number of successful extensions: 1886
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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