Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40244
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.76 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 7/37 (18%), Positives = 21/37 (56%)
 Frame = -2

Query: 148 FFFFLDTIVIVILIQKVICKGFLFSCLEY*MCVYYYF 38
           ++F+   I+  + +  ++C  +    L + +C+YY++
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/28 (21%), Positives = 15/28 (53%)
 Frame = -2

Query: 121 IVILIQKVICKGFLFSCLEY*MCVYYYF 38
           I+  +  ++C  + +      +CVYY++
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYFY 117


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 523 NLAKHNKRGVSFLYYVINVYFWIVP 449
           N +K + R +SF Y + N+ F IVP
Sbjct: 5   NYSKKDIRSLSFFYKICNI-FGIVP 28


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 523 NLAKHNKRGVSFLYYVINVYFWIVP 449
           N +K + R +SF Y + N+ F IVP
Sbjct: 5   NYSKKDIRSLSFFYKICNI-FGIVP 28


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 499 GVSFLYYVINVYFWIVPQKLSHLAIFSL 416
           GVSF+  VI ++F+    +   L   SL
Sbjct: 532 GVSFVVIVITIFFFTANVQAGELYFMSL 559


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 499 GVSFLYYVINVYFWIVPQKLSHLAIFSL 416
           GVSF+  VI ++F+    +   L   SL
Sbjct: 257 GVSFVVIVITIFFFTANVQAGELYFMSL 284


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 535 DNHPNLAKHNKRGVSFLYYVINVYFWIV 452
           DN P L  +       ++  +NV+FW++
Sbjct: 88  DNEPKLRHY------LIFIFVNVFFWVI 109


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 672 YKHFT*SLSSNYCMHEFNC 616
           +  +T S   NYC   +NC
Sbjct: 130 WHRYTLSFIENYCQFLYNC 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,872
Number of Sequences: 336
Number of extensions: 3532
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)