Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40242
         (619 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    32   0.54 
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    30   2.9  
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ...    28   8.8  

>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
            protein.
          Length = 1489

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 74   DSTKLTPLS-ADSLSEGVHCTVKYEDKIYRAILEDISSKIKVSL 202
            +S + TP+S ADS  E  HC V    +IY   +++   ++K SL
Sbjct: 982  ESQRSTPISIADSSGESNHCAVNKNSEIYPMSIDETKVEVKSSL 1025


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
            protein.
          Length = 1976

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +2

Query: 38   KAALVETA-IADYDSTKLTPLSADSLSEGVHCTVKYEDKIYRAILEDISSKIKVSLPDYG 214
            K  + ET+ +A+ DST++TPL AD + +     +K  D+I  A  +  ++ +  +L D  
Sbjct: 836  KLPVSETSTVAEMDSTEVTPLIADLVQQLNLEMLKPTDQISMANFQTQAATVASTLVDGS 895

Query: 215  NEIIT 229
            N +++
Sbjct: 896  NTLVS 900


>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
           protein.
          Length = 2515

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 14  FYVQ--LDLEK-AALVETAIADYDSTKLTPLSADSLSEGVHCTVKYEDKIYRAILEDISS 184
           FYVQ   ++ K   L++   + Y++T+  P   D L  G  C VK + + YRA +  +  
Sbjct: 610 FYVQKVANIGKFEQLMDEMFSYYNATREFP---DQLILGAPCIVKCDQEWYRAEILRVDD 666

Query: 185 KIKVSLPDYGNE 220
            + V   D+G E
Sbjct: 667 SVIVRHVDFGYE 678


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,512,372
Number of Sequences: 53049
Number of extensions: 493282
Number of successful extensions: 1042
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)