Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40241
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    25   0.86 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   3.5  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.5  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.0  

>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 236 YFLRYLTHRRKSETKMATGWGTKQ 307
           Y+ RY+T RRK+E   + G   +Q
Sbjct: 176 YYSRYITIRRKAELANSLGLSERQ 199


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 277 ENGDWLGNETDPLIGFSWK 333
           +NGD    E +PLI  +WK
Sbjct: 473 KNGDPNPTEENPLINVTWK 491


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 277 ENGDWLGNETDPLIGFSWK 333
           +NGD    E +PLI  +WK
Sbjct: 473 KNGDPNPTEENPLINVTWK 491


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 277 ENGDWLGNETDPLIGFSWK 333
           +NGD    E  PLI  +WK
Sbjct: 473 KNGDPNPKEKTPLINVTWK 491


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 230  ARRTFLHGRRGYANHHQRQIFY 165
            A  T LHG + Y N+    + Y
Sbjct: 1159 ASETILHGLKKYTNYSMEVLAY 1180


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 411 LFSCSCSGDKWLRIH 367
           L SC C   KW+R++
Sbjct: 97  LNSCFCDPAKWIRLN 111


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 411 LFSCSCSGDKWLRIH 367
           L SC C   KW+R++
Sbjct: 97  LNSCFCDPAKWIRLN 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,431
Number of Sequences: 336
Number of extensions: 3093
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)