Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40239
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72512-3|CAA96665.2|  310|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U64852-6|AAB04969.1|  359|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z92786-5|CAB07207.1|  262|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical p...    27   8.4  

>Z72512-3|CAA96665.2|  310|Caenorhabditis elegans Hypothetical
           protein R07B5.5 protein.
          Length = 310

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 536 IYILSYHSIHCTEF*KLTRKNRLIQRRIIN 447
           +Y+ +Y  ++C  F   T KN +IQ+ I+N
Sbjct: 181 VYVYTYLVVYCCAFKNKTEKNIMIQKAILN 210


>U64852-6|AAB04969.1|  359|Caenorhabditis elegans Hypothetical
           protein W01A11.2 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 60  CRYVISDVSINLRKHVGNNIMTIINTRLYCK 152
           C  VI   S  L  H   N +T+IN R +CK
Sbjct: 205 CAIVIGGASEALEAHPNKNTLTLINRRGFCK 235


>Z92786-5|CAB07207.1|  262|Caenorhabditis elegans Hypothetical
           protein F47H4.8 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 604 PRWKQ*KKVCRNLKKTNKYDYFQYTFYR 521
           P ++  +K+CR+LK+   Y  F Y FY+
Sbjct: 27  PVFEAYQKICRSLKERISYQEFDYWFYK 54


>Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical
           protein F11A5.15 protein.
          Length = 191

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 422 FCNFFLSVH**CVVGSIYFF 481
           FC FF+ +   C++GSIY F
Sbjct: 147 FCAFFILIFLFCILGSIYVF 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,170,514
Number of Sequences: 27780
Number of extensions: 249757
Number of successful extensions: 508
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)