Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40236
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   1.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.2  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   6.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 546  NKSVHHTNVCRMWNRSHDPDCVSGALTTELCGGRGRGRF 430
            N S  HT + R W   ++ D  SG LT +     G  R+
Sbjct: 1866 NFSPEHTELQRTWGMRYEYDNQSGLLTLKRTPDAGNTRY 1904


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 546  NKSVHHTNVCRMWNRSHDPDCVSGALTTELCGGRGRGRF 430
            N S  HT + R W   ++ D  SG LT +     G  R+
Sbjct: 1867 NFSPEHTELQRTWGMRYEYDNQSGLLTLKRTPDAGNTRY 1905


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 397 MHRYRIADTKHKHICFILKNQIITVFFYHSNNIRS 293
           +H  + AD KH+ +   +K+ +    F H  N RS
Sbjct: 103 IHNQKSADIKHRALHNEIKSLLYQKRFEHERNNRS 137


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 480 SGALTTELCGGRGRG 436
           S A +T LCGG G G
Sbjct: 803 SSASSTSLCGGNGGG 817


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,201
Number of Sequences: 2352
Number of extensions: 10053
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)