Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40235
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
 Frame = -1

Query: 651 YTLLG**LLRFKIT----FLS-YKCL-FTIFFFSLNYIYHSFA 541
           Y LLG  +++F I+    F+S + CL F  +FF L+YIY +++
Sbjct: 59  YKLLG--IIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYS 99


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
 Frame = -1

Query: 651 YTLLG**LLRFKIT----FLS-YKCL-FTIFFFSLNYIYHSFA 541
           Y LLG  +++F I+    F+S + CL F  +FF L+YIY +++
Sbjct: 15  YKLLG--IIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYS 55


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = -1

Query: 462 HCCDASSSTPLSMLVFDFLSFIIHLQNVFCFVME-----FVILSDKVYSPYRCNTSIFFV 298
           +CC +  S  ++  +F+    ++ L + + ++       F     + ++ Y CNT+IF +
Sbjct: 106 NCC-SKKSFRMNFAIFNLYMVLLLLFDAYLWISSVGVRMFQYYIGRSFTYYVCNTTIFLI 164

Query: 297 QECVYFIK 274
              V  IK
Sbjct: 165 FHSVLPIK 172


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/24 (25%), Positives = 16/24 (66%)
 Frame = -1

Query: 426 MLVFDFLSFIIHLQNVFCFVMEFV 355
           +++  F +F++ L+  FC V +++
Sbjct: 179 VMLIQFCAFVVVLKQKFCVVNQYI 202


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/24 (25%), Positives = 16/24 (66%)
 Frame = -1

Query: 426 MLVFDFLSFIIHLQNVFCFVMEFV 355
           +++  F +F++ L+  FC V +++
Sbjct: 4   VMLIQFCAFVVVLKQKFCVVNQYI 27


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 3/131 (2%)
 Frame = -1

Query: 591 LFTIFFFSLNYIYHSFAFFVKQICT*LLTRVYPCVSSLPALTIHCCDASSSTPLSM--LV 418
           +FT+    L  IYH F  F+      L    +    ++  L + C D  +   L +  + 
Sbjct: 155 IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAF-IFFNMHLLFLLCLDYFTLHLLFLPCIY 213

Query: 417 FDFLSFIIH-LQNVFCFVMEFVILSDKVYSPYRCNTSIFFVQECVYFIKFSLTFGRL*FI 241
           + + +FII  +  +F  V+  ++     Y  +   T    +  C+Y+  +        FI
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273

Query: 240 *FGIHSLVTNC 208
            F +H L   C
Sbjct: 274 IFTMHLLFLLC 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,454
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)