Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40235
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100305-8|AAC68919.1|  179|Caenorhabditis elegans Hypothetical ...    34   0.11 
AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    34   0.11 
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z47073-4|CAM33507.1|  954|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>AF100305-8|AAC68919.1|  179|Caenorhabditis elegans Hypothetical
           protein W04B5.6 protein.
          Length = 179

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -1

Query: 432 LSMLVFDFLSFIIHLQNVFCFVMEFVILSDKVYSPYRCNTSIFFVQECVYFIKFSLT 262
           L+  +F F+   I+L  +F  V+   + SD     + C TS+ FV  C+Y +K+  T
Sbjct: 76  LAYCIFVFVRISIYLVTIFSEVVFLKMGSDDAPISFLCFTSVLFVYACIY-VKYCKT 131


>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -1

Query: 432 LSMLVFDFLSFIIHLQNVFCFVMEFVILSDKVYSPYRCNTSIFFVQECVYFIKFSLT 262
           L+  +F F+   I+L  +F  V+   + SD     + C TS+ FV  C+Y +K+  T
Sbjct: 76  LAYCIFVFVRISIYLVTIFSEVVFLKMGSDDAPISFLCFTSVLFVYACIY-VKYCKT 131


>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
           protein T20G5.5 protein.
          Length = 1234

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 477 PALTIHCCDASSSTPLSMLVFDFLSFIIHLQNVFCFVM 364
           PA+ + C   S+ TP  +L  D  + II+L +  CFV+
Sbjct: 864 PAIVLDCGVLSAHTPCPVLPSDVCNQIIYLADTTCFVL 901


>Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical
           protein H12I19.1 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -1

Query: 585 TIFFFSLNYIYHSFAFFVK-QICT*LLTRVYPCVSSLPALTIHCCDASSSTPLSMLVFDF 409
           T++F +L +I+ S  F++   I    LT +     S P   I           S+ +   
Sbjct: 191 TVYFATLIFIFTSAFFYIPIMISVRKLTNLTSAKQSNPEKYIFWQTIVIFICKSIAIPII 250

Query: 408 LSFIIHLQNVFCFVMEFVILSDKVYSP 328
           + F IH ++    +++F+I+SD V +P
Sbjct: 251 VDFFIHSESTIGVLVDFLIISDLVTTP 277


>Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -1

Query: 660 VTAYTLLG**LLRFKITFLSYKCLFTIFFFSLNYIYHSFA---FFVKQICT 517
           +TAY++L   + RF+ +  +YK  +   +   N     FA   F    ICT
Sbjct: 103 LTAYSVLEMFMFRFRASLFNYKSTYFYIYLKANIYLFRFAMLCFLTLNICT 153


>Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -1

Query: 660 VTAYTLLG**LLRFKITFLSYKCLFTIFFFSLNYIYHSFA---FFVKQICT 517
           +TAY++L   + RF+ +  +YK  +   +   N     FA   F    ICT
Sbjct: 103 LTAYSVLEMFMFRFRASLFNYKSTYFYIYLKANIYLFRFAMLCFLTLNICT 153


>Z47073-4|CAM33507.1|  954|Caenorhabditis elegans Hypothetical
           protein ZC506.4b protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 408 LSFIIHLQNVFCFVMEFVILSDKVYSPYRC---NTSIFFVQECVYFIKFSLT 262
           LS+I+ +  + C+ M FV+LS    S   C    T I F   C+Y   F  T
Sbjct: 674 LSYILLISMIMCYCMTFVLLSKP--SAIVCAIKRTGIGFAFSCLYSAMFVKT 723


>Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical
           protein ZC506.4a protein.
          Length = 999

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 408 LSFIIHLQNVFCFVMEFVILSDKVYSPYRC---NTSIFFVQECVYFIKFSLT 262
           LS+I+ +  + C+ M FV+LS    S   C    T I F   C+Y   F  T
Sbjct: 719 LSYILLISMIMCYCMTFVLLSKP--SAIVCAIKRTGIGFAFSCLYSAMFVKT 768


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,764,441
Number of Sequences: 27780
Number of extensions: 297997
Number of successful extensions: 684
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)