Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40234
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 158 1e-37
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 133 4e-30
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 116 4e-25
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 113 3e-24
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 109 6e-23
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 107 2e-22
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 103 4e-21
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 103 5e-21
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 97 2e-19
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 97 2e-19
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 91 2e-17
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 87 3e-16
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 83 6e-15
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 80 5e-14
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 75 1e-12
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 75 1e-12
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 69 7e-11
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 69 7e-11
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 69 1e-10
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 66 5e-10
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 66 5e-10
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 66 9e-10
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 62 8e-09
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 62 1e-08
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 61 3e-08
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 60 3e-08
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 8e-08
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 58 1e-07
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 57 3e-07
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 56 6e-07
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 54 2e-06
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 53 5e-06
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 52 1e-05
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 52 1e-05
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 49 8e-05
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.017
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.16
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 37 0.36
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.36
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.64
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.64
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 0.64
UniRef50_Q13888 Cluster: TFIIH basal transcription factor comple... 35 1.9
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.9
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 1.9
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.6
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 33 4.5
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 4.5
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 5.9
UniRef50_Q8ING5 Cluster: CG31495-PA; n=1; Drosophila melanogaste... 33 5.9
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 7.8
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 7.8
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 158 bits (383), Expect = 1e-37
Identities = 72/89 (80%), Positives = 80/89 (89%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K VRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYI
Sbjct: 62 KKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYI 121
Query: 419 RRVKMAPGVTVVNSPKQKDELIIEGNSLE 505
RRV+MAPGVTVVNS QKDELI+EGN +E
Sbjct: 122 RRVEMAPGVTVVNSTAQKDELIVEGNDIE 150
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 236
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 237 SKKELA 254
+KKELA
Sbjct: 61 TKKELA 66
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 612
S SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV
Sbjct: 153 SGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 133 bits (321), Expect = 4e-30
Identities = 61/89 (68%), Positives = 71/89 (79%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYI
Sbjct: 64 RKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYI 123
Query: 419 RRVKMAPGVTVVNSPKQKDELIIEGNSLE 505
RRV+M PGV S QKDELI+EGN +E
Sbjct: 124 RRVRMRPGVACSVSQAQKDELILEGNDIE 152
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/68 (45%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKW 230
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 231 FGSKKELA 254
+G++KELA
Sbjct: 61 WGNRKELA 68
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 609
S+SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 155 SNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 116 bits (280), Expect = 4e-25
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
+RT SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M
Sbjct: 69 IRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDML 128
Query: 437 PGVTVVNSPKQKDELIIEGNSLE 505
GVT++ S K KDEL+++GN +E
Sbjct: 129 EGVTILRSEKVKDELVLDGNDIE 151
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/67 (47%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 233
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 234 GSKKELA 254
G+++ +A
Sbjct: 61 GTRRTMA 67
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 618
S SAALI Q VKNKDIRKFLDG+YVS+K T+ D
Sbjct: 154 SRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 113 bits (272), Expect = 3e-24
Identities = 48/86 (55%), Positives = 66/86 (76%)
Frame = +2
Query: 248 ACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 427
AC ++T+ S +ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+
Sbjct: 84 AC-IKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRI 142
Query: 428 KMAPGVTVVNSPKQKDELIIEGNSLE 505
++ G+T + K KDE+++ GNSLE
Sbjct: 143 ELLDGITCYRNEKAKDEIVLTGNSLE 168
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +3
Query: 102 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 254
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIA 84
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 609
S S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 171 SQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 109 bits (262), Expect = 6e-23
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = +2
Query: 248 ACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 427
AC +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +
Sbjct: 66 AC-IRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVI 124
Query: 428 KMAPGVTVVNSPKQKDELIIEGNSLED 508
K PGVTV S KDE+I+EGNSLE+
Sbjct: 125 KCLPGVTVSISSAVKDEIILEGNSLEN 151
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +3
Query: 60 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 239
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 240 KKELA 254
+K A
Sbjct: 62 RKHNA 66
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 609
S SAA I+Q V+NKDIRKFLDG+YVSE+ +
Sbjct: 153 SQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 107 bits (258), Expect = 2e-22
Identities = 50/92 (54%), Positives = 63/92 (68%)
Frame = +2
Query: 233 RIQKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 412
R ++ A P RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+ +
Sbjct: 59 RGKRNALP-RTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQI 117
Query: 413 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLED 508
RR++ PGVT+ S KDELI+ G S+ED
Sbjct: 118 KTRRIECLPGVTIAMSTNVKDELILRGISIED 149
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +3
Query: 66 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 245
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 246 ELA 254
A
Sbjct: 62 RNA 64
Score = 39.5 bits (88), Expect = 0.068
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEK 600
S +AA I +S V NKD+RKFLDG YVS +
Sbjct: 151 SHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 103 bits (247), Expect = 4e-21
Identities = 48/89 (53%), Positives = 61/89 (68%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K A +RT + V NMIKGVT GFQYKMRAVYAHFPIN + EIRNFLGEK +
Sbjct: 124 RKHAACLRTAQACVANMIKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRV 183
Query: 419 RRVKMAPGVTVVNSPKQKDELIIEGNSLE 505
R + M GVT+ QKD++++EGN ++
Sbjct: 184 RNIAMLEGVTIQEDKAQKDQVLVEGNDID 212
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 612
S SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 215 SQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 167
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 103 bits (246), Expect = 5e-21
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEK 412
+K +RTV S V+NMI GVTKG++YKMR VYAHFPIN V +G IE+RNFLG+K
Sbjct: 62 RKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDK 121
Query: 413 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLED 508
IR V + GVT+ S KDE+++ GNS+ED
Sbjct: 122 KIRNVPVRDGVTIEFSTNVKDEIVLSGNSVED 153
Score = 66.5 bits (155), Expect = 5e-10
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 236
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 237 SKKELA 254
+K +A
Sbjct: 61 GRKHVA 66
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 618
S +AA +QQ V+NKDIRKFLDG+YVS K + D
Sbjct: 155 SQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 97.5 bits (232), Expect = 2e-19
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
++ + VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK
Sbjct: 72 RRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRT 131
Query: 419 RRVKMAPGVTVVNSPKQKDELIIEGNSLE 505
R ++M GV V KDE+ +EGN +E
Sbjct: 132 RHIEMYDGVVV--KKLGKDEICLEGNDVE 158
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +1
Query: 505 RFSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 618
+ S SAA I + V+NKDIR+FLDG+YVSEK + D
Sbjct: 159 KVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
Score = 41.1 bits (92), Expect = 0.022
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Frame = +3
Query: 78 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 230
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 231 FGSKKELA 254
+G++++ A
Sbjct: 69 YGNRRDSA 76
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 97.5 bits (232), Expect = 2e-19
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = +2
Query: 236 IQKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 415
++K +RTVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 416 IRRVKM 433
+R V +
Sbjct: 121 VRPVPL 126
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 236
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 237 SKKELA 254
+KE+A
Sbjct: 61 VRKEIA 66
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 91.1 bits (216), Expect = 2e-17
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK I
Sbjct: 63 KKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRI 122
Query: 419 RRVKMAPGVTVVNSPKQKDELIIEGNSL 502
R++ M GV + + +KDE+ + G+ L
Sbjct: 123 RKIYMGQGVKIKKNEAKKDEISVFGSDL 150
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEK 600
S +AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 154 SLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
Score = 35.9 bits (79), Expect = 0.84
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 233
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 234 GSKKELA 254
KK+LA
Sbjct: 61 AGKKQLA 67
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K C V +V S + NMI+GVT G+++KM YAHFPI +EI+NFLGEK I
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 419 RRVKMAPGVTVV-NSPKQKDELIIEGNSLED 508
R +K PGVT+ N ++K+ L ++GN L +
Sbjct: 131 RTIKCLPGVTITRNEAEEKNVLTLQGNDLNN 161
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 197
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQV 47
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEK 600
S + ALI Q+ VKNKDIR+FLDG+YVSEK
Sbjct: 163 SLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 83.0 bits (196), Expect = 6e-15
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK
Sbjct: 62 RKDVAIARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAP 119
Query: 419 RRVKMAPGVTVVNSPKQKDELIIEG 493
R+ K+ PGVTV + E+I+EG
Sbjct: 120 RKAKILPGVTV---KVRGQEIIVEG 141
Score = 35.9 bits (79), Expect = 0.84
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 78 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 254
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVA 66
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK
Sbjct: 62 KKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNP 119
Query: 419 RRVKMAPGVTV 451
RR K+ PGVTV
Sbjct: 120 RRAKILPGVTV 130
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +3
Query: 78 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 254
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVA 66
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = +2
Query: 248 ACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 403
AC +RTVCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 129 AC-IRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 LGNDAPNMKQIVANQ-KVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMV- 200
+G +A + + + +Q ++IP DG TV V KSR + V G G L+R F+H+ VD+++V
Sbjct: 52 VGTEASGLMKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVE 111
Query: 201 NPRLLKVEKWFGSKKELA 254
+ R + VE WFG K A
Sbjct: 112 DGRKITVEMWFGLTKNKA 129
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = +2
Query: 263 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 442
TV S + N IK VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G
Sbjct: 89 TVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-G 147
Query: 443 VTVVNSPKQKDELIIEGNSLED 508
V ++KD ++IEG SL D
Sbjct: 148 AARVRLDERKDTIVIEGPSLSD 169
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 45 DAPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLK 218
D P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N ++
Sbjct: 18 DLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IR 73
Query: 219 VEKWFGSKKELA 254
+ W G +K +A
Sbjct: 74 IRLWNGKRKAMA 85
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEK 600
S SA I KN+D R FLDG++V+E+
Sbjct: 171 SQSAGTITNECKAKNRDSRVFLDGIFVTER 200
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 69.3 bits (162), Expect = 7e-11
Identities = 41/88 (46%), Positives = 50/88 (56%)
Frame = +2
Query: 242 KGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 421
K VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNV--------------------- 68
Query: 422 RVKMAPGVTVVNSPKQKDELIIEGNSLE 505
V+M GV S QKDELI+EGN E
Sbjct: 69 -VQMRTGVACSVSQAQKDELILEGNDTE 95
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/33 (69%), Positives = 31/33 (93%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 609
S+SAALIQ++T V+N+DIRKF+DG+YVSEK T+
Sbjct: 98 SNSAALIQKATAVENQDIRKFVDGIYVSEKGTM 130
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 69.3 bits (162), Expect = 7e-11
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
+K V T H+EN+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+
Sbjct: 80 KKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHP 137
Query: 419 RRVKM 433
RR K+
Sbjct: 138 RRAKI 142
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R +
Sbjct: 68 VGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIM 125
Query: 437 PGVTVVNSPKQKDELIIEGNSLE 505
PG V +KD++I+EG L+
Sbjct: 126 PGAKV---KIEKDDVIVEGIDLD 145
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 233
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 234 GSKKELA 254
+KK+ A
Sbjct: 60 ATKKDYA 66
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 230
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 231 FGSKKELA 254
+G++KELA
Sbjct: 61 WGNRKELA 68
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 263 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 442
T+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ G
Sbjct: 66 TLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEG 123
Query: 443 VTV 451
VTV
Sbjct: 124 VTV 126
Score = 32.7 bits (71), Expect = 7.8
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 78 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 191
++V+IP G+ V + ++TV GP+G L R+ + +D+
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL 42
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 65.7 bits (153), Expect = 9e-10
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
+ T+ V+NMI GVT G++YKM VY+HFPI +E + F+G K + V
Sbjct: 76 IGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAP 135
Query: 437 PGVTV-VNSPKQKDELIIEGNSLED 508
GV + N KDE+ IEG +LED
Sbjct: 136 EGVRIWSNESVAKDEINIEGANLED 160
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 529 IQQSTTVKNKDIRKFLDGLYV 591
I Q T +K+KD+RKFLDG+YV
Sbjct: 168 IHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 62.5 bits (145), Expect = 8e-09
Identities = 27/80 (33%), Positives = 52/80 (65%)
Frame = +2
Query: 263 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 442
++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK IRR K+ PG
Sbjct: 73 SIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKILPG 130
Query: 443 VTVVNSPKQKDELIIEGNSL 502
V V + +++++EG+ +
Sbjct: 131 VKVT---VKGEDIVVEGSDI 147
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/67 (26%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 233
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 234 GSKKELA 254
+++ A
Sbjct: 63 ADRRKKA 69
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
V T SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+
Sbjct: 66 VGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL 123
Query: 437 PGVTVVNSPKQKDELIIEGNSLED 508
G T V +E+++ G + ED
Sbjct: 124 -GETKVK--VSGNEIVVSGINKED 144
Score = 33.9 bits (74), Expect = 3.4
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 84 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 197
++IP+G++V + + T KGP+G ++R F + + I +
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEV 46
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G K I +
Sbjct: 70 VRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIP 129
Query: 437 PGVTVVNSPKQKDELIIEGNSLE 505
V V + K E+I+ +E
Sbjct: 130 SSVQVCTNNLNKKEIILLSKDIE 152
Score = 33.5 bits (73), Expect = 4.5
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 520 AALIQQSTTVKNKDIRKFLDGLYVSEK 600
++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 158 SSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
+ T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR +
Sbjct: 63 IGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI- 119
Query: 437 PGVTVVNSPKQKDELIIEGNSLE 505
G T V +EL + G +E
Sbjct: 120 HGDTDVEI--DGEELTVSGPDIE 140
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 517 SAALIQQSTTVKNKDIRKFLDGLYVSEK 600
+AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 145 TAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +2
Query: 272 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 451
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 452 VNSPKQKDELI 484
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +2
Query: 278 VENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVN 457
++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V
Sbjct: 79 LKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV-- 134
Query: 458 SPKQKDELIIEG 493
K K++++IEG
Sbjct: 135 EVKGKEDIVIEG 146
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
V T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++
Sbjct: 67 VGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV 124
Query: 437 PGVTVVNSPKQKDELIIEGNSLED 508
G T V+ + D L + G S +D
Sbjct: 125 -GETQVS--VKGDRLFLNGPSKKD 145
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 56.4 bits (130), Expect = 6e-07
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVK 430
+ T SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK I+ +
Sbjct: 67 INTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELP 124
Query: 431 MAPGVTV-VNSPKQKDELIIEGNSLE 505
V V + K + E+++E E
Sbjct: 125 YLDKVKVKIEQNKDETEIVVESPDKE 150
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/64 (25%), Positives = 37/64 (57%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 236
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 237 SKKE 248
+++E
Sbjct: 60 TRRE 63
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
+ T S V N+ +GV G+ K++ VYAHFPI + +G ++I + NF GE+ R+ K+
Sbjct: 52 LNTARSIVRNLCEGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIV 109
Query: 437 PGVTVVNSPKQKDELIIEGNSLED 508
G VV+ + +++I+ G+ L D
Sbjct: 110 GGTKVVS---KGEDVIVTGHVLTD 130
Score = 40.7 bits (91), Expect = 0.030
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEK 600
S +AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 132 SQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 53.2 bits (122), Expect = 5e-06
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
V T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+
Sbjct: 67 VGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIV 124
Query: 437 PGVTV 451
G V
Sbjct: 125 DGCKV 129
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 263 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 439
T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 70 TWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +2
Query: 272 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 451
+++ENM KGVT+G +YK++ VY+HFP + + I NF+GE P V
Sbjct: 90 AYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN-------VPRVAE 142
Query: 452 VNSPKQKDELIIEGNSL 502
+ P + E+I++G +
Sbjct: 143 IVDP-ENTEVIVQGQDI 158
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 49.2 bits (112), Expect = 8e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +2
Query: 257 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 436
+ T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R +
Sbjct: 70 LHTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIM 127
Query: 437 PGVTVVNSPKQKDELI 484
V+ PK +D L+
Sbjct: 128 GNTKVI--PKGEDVLL 141
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +1
Query: 511 SSSAALIQQSTTVKNKDIRKFLDGLYVSEK 600
+ +AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 150 TQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
Score = 33.9 bits (74), Expect = 3.4
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +3
Query: 81 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 212
+V+IP+G+TV ++ +GP G +NF+++ V I + + ++
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV 55
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.017
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 57 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 212
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +2
Query: 239 QKGACPVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 418
Q+GA VC +N I G G++Y +R + F +G +++ ++NFL +
Sbjct: 60 QQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDRSML 118
Query: 419 RRVKMAPGVTVVNSPKQ 469
K A + ++P++
Sbjct: 119 GDTKCAETLLRGSAPRK 135
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.16
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 173
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.1 bits (82), Expect = 0.36
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +3
Query: 123 RLVTVKGPRGVLKRNFKHLAVDIRM 197
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.36
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 170
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 36.3 bits (80), Expect = 0.64
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = -2
Query: 505 FQRVAFND*FILLFWRVNDSHTRCHLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIH 332
FQ V N+ FILL R T S+ F TQE++ N +T+ + VN E+ I+
Sbjct: 57 FQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRIN 116
Query: 331 STHLVLEAFSYSFNHV 284
+HLV FS + + V
Sbjct: 117 KSHLVFVTFSDTSDQV 132
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 612 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARES 505
+N R I TIQE +DIL+ D + LLN SS R S
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNS 56
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.64
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 176
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 200
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIV 46
>UniRef50_Q13888 Cluster: TFIIH basal transcription factor complex
p44 subunit; n=54; Eumetazoa|Rep: TFIIH basal
transcription factor complex p44 subunit - Homo sapiens
(Human)
Length = 395
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -3
Query: 594 RYIKTIQELSDILILDCSRLLNESSRARESSKELPSMISSS--FCFGELTTVTPGAIFTL 421
++I ++++ D+ L N S A ++ K +P S F LTT P I+ L
Sbjct: 126 KHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDL 185
Query: 420 LMYFSPKKLRISIIELPSVV 361
+ K+R+S+I L + V
Sbjct: 186 IKTLKAAKIRVSVIGLSAEV 205
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 161
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 212
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 176
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 33.5 bits (73), Expect = 4.5
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEK 227
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVER 54
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 84 VKIPDGLTVHVKSRLVTVKGPRGVLKR 164
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 164
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_Q8ING5 Cluster: CG31495-PA; n=1; Drosophila
melanogaster|Rep: CG31495-PA - Drosophila melanogaster
(Fruit fly)
Length = 341
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 499 FGRFSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLDD 621
F ++ SSA L+ S + K + IR+ L+ YVS ++ V++DD
Sbjct: 153 FIKYISSAELLGLSDSEKCQRIREVLEDAYVSRRSCVIIDD 193
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 197
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 69 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 164
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,857,423
Number of Sequences: 1657284
Number of extensions: 13046388
Number of successful extensions: 30414
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 29535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30395
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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