Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40233
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4N0L4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  
UniRef50_P98205 Cluster: Putative phospholipid-transporting ATPa...    33   8.2  

>UniRef50_Q4N0L4 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 913

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 110 SHRPLLNRSYTHDIQLHSHTYNSHT 184
           +H P L+ SYTH    H++T+NS+T
Sbjct: 559 THTPSLHNSYTHTSNTHTNTHNSYT 583


>UniRef50_P98205 Cluster: Putative phospholipid-transporting ATPase
           2; n=10; Magnoliophyta|Rep: Putative
           phospholipid-transporting ATPase 2 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 1107

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -1

Query: 429 LIFILGMYQYNTTRFVSV***YKYYKNTLRQQIVFFFVILEEILSRS--NKI-IMLYNLS 259
           LI + G Y YN T F+S    Y +YK+ L   I  FF  +  +   S  N + +M YN+ 
Sbjct: 794 LILVHGRYSYNRTAFLSQ---YSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVF 850

Query: 258 LTA 250
            T+
Sbjct: 851 YTS 853


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,280,218
Number of Sequences: 1657284
Number of extensions: 11757090
Number of successful extensions: 20642
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20635
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)