Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40233
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    29   0.034
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   4.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 0.034
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 101 CSVSHRPLLNRSYTHDIQLHSHT 169
           C  S RP L   YTH+I+LH  T
Sbjct: 282 CIFSLRPGLTHKYTHEIKLHDKT 304


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 520 LNATTLFVTSFGAKKHKAP*LYSLL 594
           LNA  +FVT    K+HK   L+ +L
Sbjct: 78  LNAYHVFVTMMTLKRHKWSTLFEIL 102


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 333 IVFFFVILEEILSRSNKIIMLYN 265
           ++F F+ L   ++  NK++  YN
Sbjct: 4   LIFAFLALAAYVAADNKVVCYYN 26


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -2

Query: 128 LIKVYVIQNKLKNRVKNVKSMY 63
           ++K YV+Q ++KN   +V+S++
Sbjct: 359 VLKQYVMQQQVKNFRHSVRSVF 380


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 280 NFITPAQYLLQDYKKKNDLL 339
           +F   A +LL DY KKN  L
Sbjct: 165 DFQPEALHLLVDYMKKNKTL 184


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 280 NFITPAQYLLQDYKKKNDLL 339
           +F   A +LL DY KKN  L
Sbjct: 479 DFQPEALHLLVDYMKKNKTL 498


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 280 NFITPAQYLLQDYKKKNDLL 339
           +F   A +LL DY KKN  L
Sbjct: 712 DFQPEALHLLVDYMKKNKTL 731


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 280 NFITPAQYLLQDYKKKNDLL 339
           +F   A +LL DY KKN  L
Sbjct: 712 DFQPEALHLLVDYMKKNKTL 731


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,106
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)