Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40233
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1112|AAF50665.1|  388|Drosophila melanogaster CG13300-P...    29   7.6  
AE014297-84|AAF52128.3|  651|Drosophila melanogaster CG32944-PB,...    28   10.0 

>AE014296-1112|AAF50665.1|  388|Drosophila melanogaster CG13300-PA
           protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 113 HRPLLNRSYTHDIQLHSHTYNSHT 184
           H+PL  + Y H  Q   H ++SHT
Sbjct: 290 HQPLQQQQYFHPYQQQQHVHHSHT 313


>AE014297-84|AAF52128.3|  651|Drosophila melanogaster CG32944-PB,
           isoform B protein.
          Length = 651

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 148 HTTTLSHIQFSYIKGCFKRNFDHFQVVRLI*KFVRGQG*IIQ 273
           H+  + H+     +     NFDHFQ++R I K   G+  I+Q
Sbjct: 157 HSLAMGHMLCVKCQSLIPINFDHFQILRAIGKGSFGKVCIVQ 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,075,938
Number of Sequences: 53049
Number of extensions: 532055
Number of successful extensions: 919
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)